Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF29 and GFF30 are separated by 117 nucleotidesGFF30 and GFF31 overlap by 4 nucleotidesGFF31 and GFF32 overlap by 4 nucleotidesGFF32 and GFF33 overlap by 4 nucleotides GFF29 - tRNA-modifying protein YgfZ, at 33,392 to 34,327 GFF29 GFF30 - Murein endolytic transglycosylase MltG, at 34,445 to 35,467 GFF30 GFF31 - Thymidylate kinase (EC 2.7.4.9), at 35,464 to 36,135 GFF31 GFF32 - DNA polymerase III delta prime subunit (EC 2.7.7.7), at 36,132 to 37,145 GFF32 GFF33 - Type IV pilus biogenesis protein PilZ, at 37,142 to 37,528 GFF33
Group Condition GFF29 GFF30 GFF31 GFF32 GFF33
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.6 N.D. N.D. -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.6 N.D. N.D. -1.0
complex community Community=arabino-guar; Passage=4 N.D. -0.6 N.D. N.D. -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.3 N.D. N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 N.D. N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 N.D. N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.3 N.D. N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.4 N.D. N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 N.D. N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.3 N.D. N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 N.D. N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 N.D. N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 N.D. N.D. -0.7
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 N.D. N.D. +0.4
complex community Community=Locust bean gum; Passage=1 N.D. +0.3 N.D. N.D. -0.6
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 N.D. N.D. +0.8
complex community Community=arabino-guar; Passage=4 N.D. +0.7 N.D. N.D. -0.2
phage phage_bap4 N.D. -0.1 N.D. N.D. +0.7
complex community Community=guar; Passage=4 N.D. +0.1 N.D. N.D. +0.7
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 N.D. N.D. +0.9
complex community Community=Locust bean gum; Passage=4 N.D. +0.5 N.D. N.D. +0.6
complex community Community=guar; Passage=4 N.D. +0.4 N.D. N.D. +0.7
phage phage_bap4 N.D. +0.0 N.D. N.D. +1.1
complex community Community=guar; Passage=4 N.D. +0.4 N.D. N.D. +0.8
phage phage_bap4 N.D. -0.0 N.D. N.D. +1.3
phage phage_bap4 N.D. +0.1 N.D. N.D. +1.3
phage phage_bap4 N.D. -0.4 N.D. N.D. +3.9
phage phage_bap4 N.D. -0.3 N.D. N.D. +4.0
phage phage_bap4 N.D. -0.1 N.D. N.D. +3.9
phage phage_bap4 N.D. -0.2 N.D. N.D. +4.1
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