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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3095 and GFF3096 are separated by 13 nucleotides
GFF3096 and GFF3097 are separated by 82 nucleotides
GFF3097 and GFF3098 are separated by 10 nucleotides
GFF3098 and GFF3099 are separated by 45 nucleotides
GFF3095 - FIG074102: hypothetical protein, at 524,931 to 525,257
GFF3095
GFF3096 - Argininosuccinate synthase (EC 6.3.4.5), at 525,271 to 526,611
GFF3096
GFF3097 - hypothetical protein, at 526,694 to 527,539
GFF3097
GFF3098 - UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98), at 527,550 to 528,602
GFF3098
GFF3099 - UPF0234 protein Yitk, at 528,648 to 529,133
GFF3099
Group
Condition
GFF3095
GFF3096
GFF3097
GFF3098
GFF3099
complex community
Community=guar; Passage=4
N.D.
N.D.
-0.5
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
N.D.
N.D.
-0.4
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
N.D.
N.D.
-0.3
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
N.D.
-0.3
N.D.
N.D.
phage
phage_bap4
N.D.
N.D.
-0.2
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
N.D.
N.D.
-0.2
N.D.
N.D.
phage
phage_bap4
N.D.
N.D.
-0.2
N.D.
N.D.
no phage control
no phage control
N.D.
N.D.
-0.2
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
N.D.
N.D.
-0.1
N.D.
N.D.
no phage control
no phage control
N.D.
N.D.
-0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
N.D.
-0.1
N.D.
N.D.
phage
phage_bap4
N.D.
N.D.
-0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
N.D.
-0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
N.D.
-0.1
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
N.D.
N.D.
-0.1
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
N.D.
N.D.
-0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
N.D.
N.D.
+0.1
N.D.
N.D.
complex community
Community=guar; Passage=4
N.D.
N.D.
+0.1
N.D.
N.D.
phage
phage_bap4
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
N.D.
N.D.
+0.1
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
N.D.
N.D.
+0.1
N.D.
N.D.
complex community
Community=guar; Passage=4
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
N.D.
N.D.
+0.1
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
N.D.
+0.2
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=1
N.D.
N.D.
+0.2
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
N.D.
+0.2
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
N.D.
N.D.
+0.2
N.D.
N.D.
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