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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3095 and GFF3096 are separated by 299 nucleotides
GFF3096 and GFF3097 are separated by 669 nucleotides
GFF3097 and GFF3098 are separated by 226 nucleotides
GFF3098 and GFF3099 are separated by 67 nucleotides
GFF3095 - Uronate isomerase (EC 5.3.1.12), at 104,042 to 105,454
GFF3095
GFF3096 - Putative methyl-accepting chemotaxis protein, at 105,754 to 106,812
GFF3096
GFF3097 - Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78), at 107,482 to 109,338
GFF3097
GFF3098 - Uncharacterized GST-like protein yghU associated with glutathionylspermidine synthetase/amidase, at 109,565 to 110,431
GFF3098
GFF3099 - Molybdenum-binding periplasmic protein, at 110,499 to 111,209
GFF3099
Group
Condition
GFF3095
GFF3096
GFF3097
GFF3098
GFF3099
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.3
-0.5
-0.1
-0.2
-0.4
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.1
-0.1
+0.0
-0.2
-0.4
phage
Br60_phage 15 MOI
+0.1
-0.2
-0.0
+0.1
-0.5
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
+0.4
-0.1
+0.1
-0.1
-0.4
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.1
-0.1
+0.0
+0.1
-0.4
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.3
-0.1
-0.1
-0.2
+0.5
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
+0.3
-0.2
+0.1
+0.1
-0.4
phage
6H2_phage 10 MOI; agar plate assay
+0.2
-0.2
-0.1
+0.1
+0.2
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
-0.1
-0.2
-0.1
+0.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.3
+0.3
-0.1
-0.2
+0.0
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.2
+0.0
+0.1
+0.0
+0.5
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.7
-0.4
-0.0
-0.1
+0.2
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
-0.1
+0.4
+0.1
+0.1
+0.1
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.1
+0.1
-0.2
+0.3
+0.5
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.2
-0.3
+0.1
+0.1
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.4
+0.2
+0.0
-0.1
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.3
-0.0
-0.1
+0.4
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.0
+0.3
-0.1
+0.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.0
+0.3
-0.2
+0.1
+0.5
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.2
+0.3
+0.1
+0.2
-0.0
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.1
+0.2
+0.0
+0.3
+0.4
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.0
+0.3
+0.2
-0.0
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+0.3
+0.3
+0.0
-0.1
+0.3
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.4
+0.1
-0.1
+0.1
+0.3
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.2
-0.4
-0.0
+0.0
+1.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.2
+0.2
+0.1
+0.2
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.1
+0.2
+0.0
+0.1
+0.7
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.1
+0.2
-0.0
+0.3
+0.7
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.1
-0.0
-0.1
+0.2
+1.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.1
-0.0
+0.1
+0.2
+0.9
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