Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3073 and GFF3074 are separated by 9 nucleotidesGFF3074 and GFF3075 are separated by 16 nucleotidesGFF3075 and GFF3076 are separated by 148 nucleotidesGFF3076 and GFF3077 are separated by 61 nucleotides GFF3073 - Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase), at 506,004 to 506,978 GFF3073 GFF3074 - Putative polysaccharide deacetylase, at 506,988 to 507,773 GFF3074 GFF3075 - Surface antigen, at 507,790 to 508,740 GFF3075 GFF3076 - SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19), at 508,889 to 509,638 GFF3076 GFF3077 - Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13), at 509,700 to 511,436 GFF3077
Group Condition GFF3073 GFF3074 GFF3075 GFF3076 GFF3077
complex community Community=guar; Passage=4 -2.0 -0.0 -0.6 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -1.0 -0.4 -0.2 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 -0.3 -0.2 -0.3
complex community Community=Kojac gum; Passage=4 -0.3 +0.5 -0.4 -0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.0 -0.2 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.1 -0.1 -0.0 -0.0
complex community Community=arabino-guar; Passage=4 -0.6 +0.1 -0.0 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.3 -0.1 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 -0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.0 -0.0 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.0 -0.0 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 -0.1 -0.0 -0.0
complex community Community=Kojac gum; Passage=1 -0.2 +0.0 -0.3 -0.1 +0.0
no phage control no phage control -0.4 +0.0 -0.1 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 -0.2 +0.1 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 +0.3 +0.0 -0.6 -0.3 +0.0
complex community Community=Locust bean gum; Passage=4 +1.0 -0.6 -0.4 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.1 +0.2 -0.1 -0.1
no phage control no phage control -0.2 -0.1 -0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 -0.0 +0.1 +0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.0 +0.0 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 +0.2 -0.0 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.2 -0.1 -0.0 +0.0
phage phage_bap4 -0.4 +0.1 -0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.1 -0.1 +0.1 -0.1
complex community Community=guar; Passage=4 -0.0 +0.4 -0.3 +0.2 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.4 +0.3 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.6 +0.3 +0.0 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 +0.9 -0.3 -0.0 -0.0 +0.1
complex community Community=guar; Passage=4 +1.1 -0.1 -0.4 +0.1 +0.1
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