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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3067 and GFF3068 are separated by 28 nucleotides
GFF3068 and GFF3069 are separated by 140 nucleotides
GFF3069 and GFF3070 are separated by 18 nucleotides
GFF3070 and GFF3071 overlap by 4 nucleotides
GFF3067 - Nitrogen regulation protein NtrB (EC 2.7.13.3), at 500,946 to 502,025
GFF3067
GFF3068 - FIG00538108: hypothetical protein, at 502,054 to 502,563
GFF3068
GFF3069 - Glutamine synthetase type I (EC 6.3.1.2), at 502,704 to 504,119
GFF3069
GFF3070 - no description, at 504,138 to 504,269
GFF3070
GFF3071 - ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13), at 504,266 to 505,078
GFF3071
Group
Condition
GFF3067
GFF3068
GFF3069
GFF3070
GFF3071
complex community
Community=guar; Passage=4
-2.1
+0.4
N.D.
-1.8
+0.1
complex community
Community=arabino-guar; Passage=4
-2.7
-1.1
N.D.
+0.6
-0.3
complex community
Community=arabino-guar; Passage=4
-2.1
-0.8
N.D.
-0.1
-0.1
complex community
Community=Kojac gum; Passage=4
-3.0
-0.1
N.D.
+0.5
-0.2
complex community
Community=arabino-guar; Passage=4
-2.5
-0.9
N.D.
+0.2
+0.4
complex community
Community=guar; Passage=4
-2.3
+0.7
N.D.
-0.6
-0.3
complex community
Community=guar; Passage=4
-3.1
+0.6
N.D.
+0.1
+0.4
complex community
Community=Locust bean gum; Passage=4
-2.9
+0.3
N.D.
-0.2
+0.8
complex community
Community=arabino-guar; Passage=4
-0.9
-0.6
N.D.
+0.5
-0.5
complex community
Community=Locust bean gum; Passage=4
-2.2
+0.8
N.D.
+0.1
+0.3
complex community
Community=guar; Passage=4
-2.0
+1.1
N.D.
-0.4
+0.5
complex community
Community=Locust bean gum; Passage=4
-2.2
+1.2
N.D.
+0.7
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-1.0
N.D.
+0.0
+0.3
complex community
Community=Locust bean gum; Passage=4
-1.6
+0.6
N.D.
-0.0
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
-0.8
N.D.
-0.3
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.9
N.D.
-0.1
+0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.4
-0.6
N.D.
+0.5
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
-1.0
N.D.
+0.3
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-1.0
N.D.
+0.5
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.4
-0.5
N.D.
-0.4
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.7
N.D.
+0.4
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.5
-0.9
N.D.
+0.4
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.8
N.D.
+0.7
+0.6
phage
phage_bap4
-0.4
+1.4
N.D.
+0.1
+0.1
phage
phage_bap4
-0.4
+1.4
N.D.
+0.4
-0.0
phage
phage_bap4
+0.1
+1.4
N.D.
+0.5
-0.1
phage
phage_bap4
-0.5
+3.8
N.D.
+0.2
+0.1
phage
phage_bap4
-0.0
+3.7
N.D.
+0.2
+0.1
phage
phage_bap4
-0.1
+3.9
N.D.
+0.2
+0.0
phage
phage_bap4
+0.1
+3.9
N.D.
+0.1
+0.1
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