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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3059 and GFF3060 overlap by 4 nucleotides
GFF3060 and GFF3061 are separated by 88 nucleotides
GFF3061 and GFF3062 are separated by 120 nucleotides
GFF3062 and GFF3063 are separated by 177 nucleotides
GFF3059 - hypothetical protein, at 3,133,477 to 3,133,764
GFF3059
GFF3060 - Imidazole glycerol phosphate synthase amidotransferase subunit HisH, at 3,133,761 to 3,134,375
GFF3060
GFF3061 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 3,134,464 to 3,135,201
GFF3061
GFF3062 - Imidazole glycerol phosphate synthase cyclase subunit, at 3,135,322 to 3,136,086
GFF3062
GFF3063 - hypothetical protein, at 3,136,264 to 3,136,512
GFF3063
Group
Condition
GFF3059
GFF3060
GFF3061
GFF3062
GFF3063
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.8
-4.6
-5.0
-4.5
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.5
-4.5
-4.3
-4.4
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.3
-4.4
-4.6
-4.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.5
-4.5
-4.2
-4.3
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.1
-4.5
-4.6
-4.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.9
-4.3
-4.5
-4.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.6
-4.1
-4.6
-4.1
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.0
-4.6
-4.3
-4.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.3
-4.0
-3.8
-3.6
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.1
-3.8
-3.9
-3.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.6
-3.5
-3.7
-3.5
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.6
-3.6
-3.5
-3.5
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.2
-3.9
-3.5
-3.6
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.8
-4.2
-3.6
-3.9
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.3
-3.1
-3.4
-3.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.9
-3.2
-3.4
-3.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.1
-2.6
-3.3
-2.9
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.4
-2.8
-3.0
-2.9
-0.1
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