Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3048 and GFF3049 are separated by 40 nucleotidesGFF3049 and GFF3050 are separated by 166 nucleotidesGFF3050 and GFF3051 are separated by 28 nucleotidesGFF3051 and GFF3052 are separated by 118 nucleotides GFF3048 - Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4), at 483,415 to 484,116 GFF3048 GFF3049 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 484,157 to 484,909 GFF3049 GFF3050 - Lactam utilization protein LamB, at 485,076 to 485,840 GFF3050 GFF3051 - no description, at 485,869 to 486,267 GFF3051 GFF3052 - Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54), at 486,386 to 487,369 GFF3052
Group Condition GFF3048 GFF3049 GFF3050 GFF3051 GFF3052
complex community Community=guar; Passage=4 -0.2 N.D. -3.9 N.D. -1.2
complex community Community=guar; Passage=4 +0.5 N.D. -3.6 N.D. -1.9
complex community Community=arabino-guar; Passage=4 +0.6 N.D. -3.8 N.D. -1.6
complex community Community=arabino-guar; Passage=4 +0.5 N.D. -0.6 N.D. -3.9
complex community Community=guar; Passage=4 -1.1 N.D. -2.8 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus -0.4 N.D. -0.8 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 N.D. -0.9 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 +1.1 N.D. +0.5 N.D. -3.4
complex community Community=arabino-guar; Passage=4 +1.3 N.D. -2.7 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -2.0 N.D. +0.3 N.D. +0.0
complex community Community=guar; Passage=4 +0.3 N.D. -1.0 N.D. -0.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.7 N.D. -1.8 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. -1.4 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 N.D. -1.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 N.D. -0.9 N.D. +0.4
complex community Community=Kojac gum; Passage=4 -0.6 N.D. -0.5 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 N.D. -0.9 N.D. -0.3
no phage control no phage control -1.4 N.D. +0.6 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus +0.5 N.D. -1.3 N.D. -0.0
complex community Community=arabino-guar; Passage=4 +0.7 N.D. -0.1 N.D. -1.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 N.D. -0.9 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. -1.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.8 N.D. -1.1 N.D. -0.2
phage phage_bap4 -0.6 N.D. -0.6 N.D. +0.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.9 N.D. -0.9 N.D. -0.2
phage phage_bap4 -0.6 N.D. -0.4 N.D. +0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.9 N.D. -0.6 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.9 N.D. -0.5 N.D. +0.4
phage phage_bap4 -0.2 N.D. +0.4 N.D. +0.8
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +1.7 N.D. -0.5
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