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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3046 and GFF3047 are separated by 20 nucleotides
GFF3047 and GFF3048 overlap by 4 nucleotides
GFF3048 and GFF3049 are separated by 64 nucleotides
GFF3049 and GFF3050 are separated by 123 nucleotides
GFF3046 - hypothetical protein, at 3,122,767 to 3,123,582
GFF3046
GFF3047 - Two-component oxygen-sensor histidine kinase FixL, at 3,123,603 to 3,124,748
GFF3047
GFF3048 - Two-component nitrogen fixation transcriptional regulator FixJ, at 3,124,745 to 3,125,362
GFF3048
GFF3049 - Transcriptional regulator, Crp/Fnr family, at 3,125,427 to 3,126,185
GFF3049
GFF3050 - Prolipoprotein diacylglyceryl transferase, at 3,126,309 to 3,127,175
GFF3050
Group
Condition
GFF3046
GFF3047
GFF3048
GFF3049
GFF3050
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.6
-1.0
-0.6
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.6
-1.0
-0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.8
-0.9
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.8
-0.6
-0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.7
-0.8
-0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.6
-0.4
-0.7
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.8
-0.2
-1.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.2
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.6
+0.6
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
+0.5
+0.4
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.3
+0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.4
+0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.3
+0.5
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.3
+0.4
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.4
+0.3
+0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.4
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.6
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.5
+0.7
+0.7
N.D.
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