Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3045 and GFF3046 are separated by 64 nucleotidesGFF3046 and GFF3047 overlap by 4 nucleotidesGFF3047 and GFF3048 are separated by 21 nucleotidesGFF3048 and GFF3049 are separated by 40 nucleotides GFF3045 - Glutamine ABC transporter, substrate-binding protein GlnH, at 480,919 to 481,761 GFF3045 GFF3046 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 481,826 to 482,617 GFF3046 GFF3047 - Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4), at 482,614 to 483,393 GFF3047 GFF3048 - Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4), at 483,415 to 484,116 GFF3048 GFF3049 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 484,157 to 484,909 GFF3049
Group Condition GFF3045 GFF3046 GFF3047 GFF3048 GFF3049
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. -1.4 -2.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.9 -0.5 N.D.
no phage control no phage control +0.2 N.D. -0.2 -1.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 N.D. -0.6 -0.6 N.D.
complex community Community=Kojac gum; Passage=4 +0.3 N.D. -0.8 -0.6 N.D.
complex community Community=guar; Passage=4 +0.0 N.D. -0.0 -1.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 N.D. -0.2 -0.7 N.D.
phage phage_bap4 -0.2 N.D. -0.0 -0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. -0.6 -0.3 N.D.
no phage control no phage control -0.1 N.D. +0.3 -0.5 N.D.
complex community Community=guar; Passage=4 +0.1 N.D. -0.7 +0.3 N.D.
phage phage_bap4 +0.2 N.D. +0.1 -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 N.D. -0.1 +0.4 N.D.
phage phage_bap4 +0.2 N.D. +0.2 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 N.D. -0.2 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 N.D. -0.3 +0.7 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 N.D. -0.6 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.4 N.D. +0.1 +0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. -0.3 +0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. -0.2 +0.8 N.D.
phage phage_bap4 +0.3 N.D. -0.1 +0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 N.D. -0.4 +0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 N.D. +0.1 +0.7 N.D.
complex community Community=guar; Passage=4 +0.4 N.D. -0.2 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.4 +1.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 N.D. -0.1 +0.9 N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. +0.0 +1.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. +0.0 +0.9 N.D.
phage phage_bap4 +0.4 N.D. +0.6 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. +0.5 +0.4 N.D.
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