Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3028 and GFF3029 are separated by 58 nucleotidesGFF3029 and GFF3030 overlap by 1 nucleotidesGFF3030 and GFF3031 are separated by 74 nucleotidesGFF3031 and GFF3032 are separated by 195 nucleotides GFF3028 - T6SS outer membrane component TssL (ImpK/VasF), at 456,521 to 457,282 GFF3028 GFF3029 - T6SS component TssM (IcmF/VasK), at 457,341 to 461,426 GFF3029 GFF3030 - Uncharacterized protein ImpA, at 461,426 to 462,625 GFF3030 GFF3031 - hypothetical protein, at 462,700 to 464,118 GFF3031 GFF3032 - Two-component transcriptional response regulator, LuxR family, at 464,314 to 465,069 GFF3032
Group Condition GFF3028 GFF3029 GFF3030 GFF3031 GFF3032
complex community Community=Locust bean gum; Passage=4 +0.0 +0.3 -1.5 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.5 +0.0 -0.7 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.0 -0.5 -0.5 -0.0 -0.3
complex community Community=guar; Passage=4 -0.2 +0.0 -0.1 +0.2 -0.9
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 -0.3 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 -0.2 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.0 -0.2 +0.1 -0.5
complex community Community=arabino-guar; Passage=4 +0.5 +0.0 -0.7 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -0.3 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.6 +0.0 -0.0 +0.1 -0.1
complex community Community=guar; Passage=4 +0.5 +0.3 -0.7 -0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.7 -0.1 +0.3
complex community Community=Kojac gum; Passage=1 -0.3 -0.1 -0.1 +0.1 +0.2
phage phage_bap4 +0.2 +0.2 -0.3 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 -0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.0 -0.1 +0.1 +0.3
complex community Community=guar; Passage=4 +0.8 -0.2 -0.0 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 +0.1 -0.2 +0.4
phage phage_bap4 +0.4 +0.2 -0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.1 -0.1 -0.0 +0.2
complex community Community=Locust bean gum; Passage=1 +0.4 +0.1 -0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 +0.1 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.2 +0.1 +0.2
complex community Community=guar; Passage=4 +0.5 +0.3 -0.5 +0.1 +0.0
complex community Community=Locust bean gum; Passage=4 +0.7 -0.1 -0.5 +0.1 +0.3
no phage control no phage control +0.4 +0.2 -0.1 +0.0 -0.0
phage phage_bap4 +0.1 +0.1 -0.1 +0.2 +0.3
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -0.9 +0.3 +0.9
phage phage_bap4 +0.3 +0.2 -0.1 -0.0 +0.5
complex community Community=Kojac gum; Passage=4 +1.1 +0.2 +0.1 +0.2 +0.9
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