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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3022 and GFF3023 are separated by 373 nucleotides
GFF3023 and GFF3024 are separated by 25 nucleotides
GFF3024 and GFF3025 are separated by 0 nucleotides
GFF3025 and GFF3026 overlap by 13 nucleotides
GFF3022 - D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72), at 37,011 to 38,057
GFF3022
GFF3023 - Predicted regulator of STY3230 transporter operon, at 38,431 to 38,856
GFF3023
GFF3024 - Substrate-specific component STY3230 of queuosine-regulated ECF transporter, at 38,882 to 39,460
GFF3024
GFF3025 - Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter, at 39,461 to 40,168
GFF3025
GFF3026 - ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter, at 40,156 to 40,833
GFF3026
Group
Condition
GFF3022
GFF3023
GFF3024
GFF3025
GFF3026
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-2.1
+0.1
-0.0
+0.1
-0.3
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-1.3
-0.4
+0.1
-0.3
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.7
-0.1
+0.1
-0.1
-0.7
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-1.0
-0.1
-0.0
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-1.5
+0.3
+0.1
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.8
+0.5
+0.1
-0.2
-1.0
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.4
-0.3
+0.1
+0.2
-0.9
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.4
-0.6
+0.0
+0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.6
-0.2
-0.0
-0.2
-0.2
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
-0.6
-0.2
+0.0
+0.0
-0.2
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
+0.0
-0.6
-0.1
-0.2
-0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.0
-0.3
-0.4
+0.1
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.4
-0.4
+0.3
+0.1
-0.2
phage
6F2_phage 15 MOI
+0.0
-0.1
+0.1
+0.1
-0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
-0.7
+0.2
+0.0
+0.1
-0.1
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.2
-0.4
+0.2
+0.0
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-0.1
+0.0
-0.1
-0.3
+0.4
phage
phi19h1_phage 15 MOI
+0.0
+0.4
-0.1
+0.0
-0.5
phage
6F2_phage 15 MOI
-0.0
-0.3
-0.2
+0.1
+0.3
phage
6H2_phage 10 MOI; agar plate assay
-0.3
-0.1
+0.5
+0.0
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
+0.3
-0.2
+0.2
+0.1
-0.5
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.4
-0.3
-0.5
+0.2
+0.4
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.1
+0.4
+0.3
+0.0
-0.5
nophagecontrol
No phage control
-0.3
+0.1
+0.0
+0.2
+0.4
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.3
+0.1
+0.0
-0.0
+0.8
phage
Ffm_phage 10 MOI; agar plate assay
-0.2
+0.5
+0.1
+0.3
+0.1
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
+0.1
+0.2
+0.0
+0.3
+0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.2
+0.4
+0.2
+0.1
+0.5
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.1
+0.3
-0.1
+0.0
+0.8
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.7
+0.2
+0.1
+0.2
+0.4
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