Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF300 and GFF301 overlap by 4 nucleotidesGFF301 and GFF302 overlap by 1 nucleotidesGFF302 and GFF303 are separated by 48 nucleotidesGFF303 and GFF304 are separated by 117 nucleotides GFF300 - Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), at 333,647 to 334,279 GFF300 GFF301 - Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3), at 334,276 to 335,193 GFF301 GFF302 - Phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 335,193 to 336,494 GFF302 GFF303 - Probable transcriptional regulatory protein YebC, at 336,543 to 337,268 GFF303 GFF304 - Ubiquinone/menaquinone biosynthesis methyltransferase family protein, at 337,386 to 338,174 GFF304
Group Condition GFF300 GFF301 GFF302 GFF303 GFF304
complex community Community=arabino-guar; Passage=4 N.D. N.D. -4.3 -5.1 +0.0
complex community Community=guar; Passage=4 N.D. N.D. -4.4 -2.5 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -4.3 -2.7 +0.5
complex community Community=arabino-guar; Passage=4 N.D. N.D. -4.5 -2.1 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -3.9 -2.6 +0.7
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -4.1 -0.9 +0.0
complex community Community=guar; Passage=4 N.D. N.D. -4.4 -0.7 +0.1
complex community Community=Kojac gum; Passage=4 N.D. N.D. -4.1 -1.2 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -4.2 -0.9 +0.4
complex community Community=guar; Passage=4 N.D. N.D. -4.1 -0.9 +0.4
complex community Community=guar; Passage=4 N.D. N.D. -4.1 -0.9 +0.5
complex community Community=arabino-guar; Passage=4 N.D. N.D. -4.2 -0.5 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -4.1 -0.4 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -2.8 -0.9 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -2.8 -0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -2.9 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -2.8 -0.7 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -2.9 -0.5 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -2.8 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -2.9 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -2.9 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -2.8 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -2.8 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -2.9 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -2.8 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -2.4 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -2.9 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -2.8 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -2.8 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -2.9 -0.2 +0.2
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