Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3010 and GFF3011 overlap by 11 nucleotidesGFF3011 and GFF3012 are separated by 48 nucleotidesGFF3012 and GFF3013 are separated by 49 nucleotidesGFF3013 and GFF3014 are separated by 29 nucleotides GFF3010 - no description, at 437,971 to 438,114 GFF3010 GFF3011 - T6SS component TssB (ImpB/VipA), at 438,104 to 438,679 GFF3011 GFF3012 - T6SS component TssC (ImpC/VipB), at 438,728 to 440,239 GFF3012 GFF3013 - KEGG: type VI secretion system secreted protein Hcp, at 440,289 to 440,771 GFF3013 GFF3014 - KEGG: type VI secretion system protein ImpF, at 440,801 to 441,259 GFF3014
Group Condition GFF3010 GFF3011 GFF3012 GFF3013 GFF3014
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.1 -1.2 -0.7
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.3 -0.9 -0.6
complex community Community=guar; Passage=4 N.D. -0.0 +0.1 -0.1 -1.6
complex community Community=guar; Passage=4 N.D. -0.2 -0.2 -0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.2 -0.2 -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 -0.2 -0.6 -0.2
complex community Community=Kojac gum; Passage=4 N.D. -0.1 -0.0 +0.0 -0.8
phage phage_bap4 N.D. -0.1 +0.0 -0.7 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.0 -0.0 -0.7 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.1 -0.2 -0.6
complex community Community=guar; Passage=4 N.D. -0.1 -0.2 -1.3 +1.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.0 +0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 -0.0 -0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 -0.1 +0.3 -0.7
phage phage_bap4 N.D. +0.1 -0.1 -0.4 +0.3
phage phage_bap4 N.D. +0.2 +0.0 -0.4 +0.2
complex community Community=Kojac gum; Passage=1 N.D. -0.1 +0.0 +0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.2 +0.5 -0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.0 -0.0 +0.9 -0.7
phage phage_bap4 N.D. +0.1 -0.0 -0.2 +0.5
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +0.1 +0.9 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.2 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 -0.1 +0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.2 +0.4 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.2 -0.1 +0.1 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.3 +0.3 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.2 +0.6 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 +0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 +0.0 +0.7 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.0 -0.1 +0.7 +0.7
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