Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3009 and GFF3010 are separated by 395 nucleotidesGFF3010 and GFF3011 overlap by 11 nucleotidesGFF3011 and GFF3012 are separated by 48 nucleotidesGFF3012 and GFF3013 are separated by 49 nucleotides GFF3009 - NADP-specific glutamate dehydrogenase (EC 1.4.1.4), at 436,232 to 437,575 GFF3009 GFF3010 - no description, at 437,971 to 438,114 GFF3010 GFF3011 - T6SS component TssB (ImpB/VipA), at 438,104 to 438,679 GFF3011 GFF3012 - T6SS component TssC (ImpC/VipB), at 438,728 to 440,239 GFF3012 GFF3013 - KEGG: type VI secretion system secreted protein Hcp, at 440,289 to 440,771 GFF3013
Group Condition GFF3009 GFF3010 GFF3011 GFF3012 GFF3013
complex community Community=guar; Passage=4 +0.4 N.D. -0.1 -0.2 -1.3
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. +0.1 -0.3 -0.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 N.D. -0.2 -0.2 -0.6
phage phage_bap4 -0.1 N.D. -0.1 +0.0 -0.7
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. +0.2 -0.1 -1.2
complex community Community=guar; Passage=4 -0.1 N.D. -0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 N.D. +0.0 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. -0.0 +0.1 -0.5
phage phage_bap4 -0.1 N.D. +0.1 -0.1 -0.4
complex community Community=guar; Passage=4 +0.2 N.D. -0.0 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 +0.4 N.D. +0.0 -0.0 -0.7
phage phage_bap4 +0.1 N.D. +0.2 +0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. +0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. +0.1 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 N.D. -0.2 -0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. +0.1 -0.2 +0.5
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. +0.2 -0.1 -0.2
complex community Community=Kojac gum; Passage=1 +0.2 N.D. -0.1 +0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. +0.1 -0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. +0.0 -0.1 +0.5
complex community Community=arabino-guar; Passage=4 -0.0 N.D. +0.0 -0.1 +0.7
complex community Community=arabino-guar; Passage=4 -0.3 N.D. +0.0 -0.0 +0.9
complex community Community=Locust bean gum; Passage=1 +0.0 N.D. +0.0 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.0 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 N.D. +0.1 +0.0 +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. +0.1 +0.1 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 N.D. +0.2 -0.1 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. +0.2 -0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.1 +0.0 +0.7
complex community Community=arabino-guar; Passage=4 +0.2 N.D. +0.3 +0.3 +0.3
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