Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3001 and GFF3002 overlap by 14 nucleotidesGFF3002 and GFF3003 overlap by 4 nucleotidesGFF3003 and GFF3004 overlap by 4 nucleotidesGFF3004 and GFF3005 overlap by 4 nucleotides GFF3001 - FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase, at 79,090 to 80,436 GFF3001 GFF3002 - (3R)-hydroxymyristoyl-[ACP] dehydratase (EC 4.2.1.-), at 80,423 to 80,731 GFF3002 GFF3003 - Lysophospholipid acyltransferase, at 80,728 to 81,633 GFF3003 GFF3004 - FIG027190: Putative transmembrane protein, at 81,630 to 82,193 GFF3004 GFF3005 - FIG021862: membrane protein, exporter, at 82,190 to 84,529 GFF3005
Group Condition GFF3001 GFF3002 GFF3003 GFF3004 GFF3005
carbon source L-Lactate (C) -0.3 N.D. -0.1 -0.2 -0.3
carbon source L-Lactate (C) +0.1 N.D. -0.5 -0.1 -0.2
carbon source L-Citrulline (C) +0.0 N.D. -0.3 -0.2 -0.2
carbon source anthranilic (C) -0.1 N.D. -0.0 -0.3 -0.3
carbon source butyrate (C) -0.3 N.D. -0.1 -0.2 -0.1
carbon source D-Glucuronic Acid (C) -0.1 N.D. -0.4 +0.0 -0.2
carbon source acetate (C) +0.0 N.D. -0.3 -0.5 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 N.D. -0.5 -0.4 -0.1
carbon source D-Alanine (C) -0.1 N.D. +0.1 -0.4 -0.1
carbon source Adipic (C) +0.0 N.D. +0.1 -0.4 -0.2
carbon source L-Threonine (C) -0.3 N.D. -0.2 +0.2 -0.2
carbon source L-Proline (C) -0.1 N.D. +0.2 -0.2 -0.3
carbon source N-Acetyl-L-glutamine (C) +0.1 N.D. +0.1 -0.2 -0.3
carbon source Shikimic Acid (C) -0.0 N.D. -0.2 +0.3 -0.3
carbon source Ethanol (C) +0.3 N.D. +0.0 -0.2 -0.3
carbon source D,L-Lactate (C) -0.4 N.D. +0.1 +0.2 -0.0
carbon source D-Gluconic Acid (C) -0.1 N.D. +0.5 -0.1 -0.4
carbon source Ying_sugar7 rep B; time point 2 -0.1 N.D. -0.3 +0.5 -0.1
carbon source Ethanol (C) +0.3 N.D. -0.0 +0.1 -0.3
carbon source L-Serine (C) +0.1 N.D. -0.2 +0.2 +0.2
carbon source Ying_sugar7 rep A; time point 3 +0.3 N.D. +0.2 -0.2 -0.0
carbon source casaminos (C) +0.2 N.D. -0.1 +0.4 -0.1
carbon source 5-Keto-D-Gluconic Acid potassium salt (C) +0.3 N.D. +0.3 +0.1 -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 N.D. +0.1 +0.5 +0.0
carbon source L-Arginine (C) +0.2 N.D. +0.2 +0.2 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.1 N.D. -0.2 +0.5 +0.2
carbon source L-Asparagine (C) +0.2 N.D. +0.3 +0.2 -0.1
carbon source propionate (C) +0.4 N.D. +0.2 +0.1 -0.1
carbon source L-Glutamic (C) -0.0 N.D. +0.3 +0.2 +0.2
carbon source Ying_Others16 rep A; time point 3 +0.3 N.D. +0.1 +0.1 +0.1
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