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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2998 and GFF2999 are separated by 4 nucleotides
GFF2999 and GFF3000 are separated by 19 nucleotides
GFF3000 and GFF3001 are separated by 82 nucleotides
GFF3001 and GFF3002 are separated by 52 nucleotides
GFF2998 - Uncharacterized protein GguC, at 3,057,145 to 3,058,137
GFF2998
GFF2999 - D-galactose 1-dehydrogenase (EC 1.1.1.48), at 3,058,142 to 3,059,068
GFF2999
GFF3000 - alpha-L-arabinofuranosidase (EC 3.2.1.55), at 3,059,088 to 3,060,653
GFF3000
GFF3001 - Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99), at 3,060,736 to 3,061,764
GFF3001
GFF3002 - alpha-L-arabinofuranosidase II (EC 3.2.1.55), at 3,061,817 to 3,063,250
GFF3002
Group
Condition
GFF2998
GFF2999
GFF3000
GFF3001
GFF3002
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
-0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
+0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.0
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
-0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
-0.0
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
+0.1
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.1
+0.1
+0.1
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