Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2996 and GFF2997 are separated by 113 nucleotidesGFF2997 and GFF2998 are separated by 2 nucleotidesGFF2998 and GFF2999 are separated by 169 nucleotidesGFF2999 and GFF3000 overlap by 4 nucleotides GFF2996 - Thiol-disulfide isomerase and thioredoxins, at 427,294 to 427,677 GFF2996 GFF2997 - FIG027190: Putative transmembrane protein, at 427,791 to 428,129 GFF2997 GFF2998 - Virulence factor BrkB, at 428,132 to 429,343 GFF2998 GFF2999 - Putative transmembrane protein, at 429,513 to 429,875 GFF2999 GFF3000 - D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2), at 429,872 to 431,299 GFF3000
Group Condition GFF2996 GFF2997 GFF2998 GFF2999 GFF3000
complex community Community=arabino-guar; Passage=4 N.D. -0.3 -0.1 -0.4 -1.7
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.4 -0.1 -1.2
complex community Community=guar; Passage=4 N.D. -0.2 -0.2 -0.4 -0.5
phage phage_bap4 N.D. -0.5 -0.0 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. -1.3 +0.0 -0.0 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 -0.1 -0.7 +0.6
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.1 -0.5 +0.2
complex community Community=guar; Passage=4 N.D. -0.5 +0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 -0.1 -0.2 +0.4
complex community Community=guar; Passage=4 N.D. -0.8 -0.1 -0.0 +0.6
complex community Community=guar; Passage=4 N.D. -0.8 +0.1 +0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.1 -0.2 +0.4
phage phage_bap4 N.D. -0.4 +0.0 -0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.6 -0.0 -0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.3 -0.0 -0.5 +0.6
phage phage_bap4 N.D. -0.4 +0.2 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.5 -0.4 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.1 -0.5 +0.5
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.1 -0.4 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.2 -0.3 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.0 -0.3 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.2 -0.4 +0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.3 -0.0 -0.5 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.0 -0.2 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.1 -0.4 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.1 -0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 -0.0 -0.3 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.4 +0.1 -0.3 +0.5
complex community Community=Kojac gum; Passage=4 N.D. +0.3 -0.1 +0.3 +0.8
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