Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2983 and GFF2984 are separated by 87 nucleotidesGFF2984 and GFF2985 are separated by 8 nucleotidesGFF2985 and GFF2986 are separated by 4 nucleotidesGFF2986 and GFF2987 are separated by 30 nucleotides GFF2983 - Transcriptional regulator YfeR, LysR family, at 413,448 to 414,401 GFF2983 GFF2984 - Adenosine deaminase (EC 3.5.4.4), at 414,489 to 415,586 GFF2984 GFF2985 - BUG/TctC family periplasmic protein, at 415,595 to 416,572 GFF2985 GFF2986 - Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1), at 416,577 to 417,674 GFF2986 GFF2987 - CBS domain protein, at 417,705 to 418,157 GFF2987
Group Condition GFF2983 GFF2984 GFF2985 GFF2986 GFF2987
complex community Community=Kojac gum; Passage=4 -0.2 -0.7 -0.1 +0.3 -3.9
complex community Community=guar; Passage=4 -0.2 -0.2 -0.3 +0.1 -3.8
complex community Community=guar; Passage=4 -0.5 -0.3 +0.1 -0.2 -3.4
complex community Community=arabino-guar; Passage=4 -0.4 +0.0 +0.3 +0.1 -3.2
complex community Community=guar; Passage=4 -0.5 +0.3 +0.3 -0.2 -3.0
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 -0.5 +0.2 -2.0
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 -0.0 +0.2 -2.9
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -0.2 +0.2 -2.7
complex community Community=Locust bean gum; Passage=4 -0.2 -0.0 +0.1 +0.2 -2.6
complex community Community=arabino-guar; Passage=4 +0.2 -0.4 +0.7 -0.1 -2.7
complex community Community=guar; Passage=4 -0.3 -0.0 +0.1 -0.0 -1.9
complex community Community=Locust bean gum; Passage=4 -0.2 -0.0 +0.2 -0.4 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.1 -0.1 +0.1 -1.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.2 -0.2 -0.1 -0.2
phage phage_bap4 -0.3 -0.5 -0.2 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.3 -0.0 -0.1 -1.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.0 -0.1 -0.3 -0.5
phage phage_bap4 +0.0 -0.3 -0.2 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.0 -0.2 +0.2 -0.8
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 -0.3 +0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.2 -0.1 +0.0 -0.7
complex community Community=arabino-guar; Passage=4 +0.5 -0.2 +0.4 -0.0 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 -0.1 +0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.2 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.1 +0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.2 +0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.3 -0.2 -0.0 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.3 -0.1 -0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.1 -0.1 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 -0.1 +0.0 -0.5
remove
GFF2983
plot
remove
GFF2984
plot
remove
GFF2985
remove
GFF2986
plot
remove
GFF2987
plot