Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2978 and GFF2979 are separated by 0 nucleotidesGFF2979 and GFF2980 are separated by 81 nucleotidesGFF2980 and GFF2981 are separated by 357 nucleotidesGFF2981 and GFF2982 overlap by 4 nucleotides GFF2978 - Aromatic ring-cleaving dioxygenase, at 409,250 to 409,597 GFF2978 GFF2979 - Glutathione S-transferase (EC 2.5.1.18), at 409,598 to 410,254 GFF2979 GFF2980 - Intracellular PHB depolymerase PhaZ2, at 410,336 to 411,556 GFF2980 GFF2981 - no description, at 411,914 to 412,807 GFF2981 GFF2982 - Histone acetyltransferase HPA2 and related acetyltransferases, at 412,804 to 413,433 GFF2982
Group Condition GFF2978 GFF2979 GFF2980 GFF2981 GFF2982
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.3 +0.0 +0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.9 -0.3 -0.2 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 -0.2 -0.2 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.0 -0.1 -0.0 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.4 +0.0 -0.2 -0.1
complex community Community=guar; Passage=4 -0.9 +0.2 -0.3 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 -0.4 +0.1 -0.1 -0.1
no phage control no phage control -0.6 -0.1 -0.1 -0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.2 +0.1 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.8 -0.2 -0.1 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.4 +0.1 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.0 +0.1 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 -0.1 -0.0 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.1 +0.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 +0.1 -0.3 -0.1
complex community Community=guar; Passage=4 -0.9 +0.2 +0.1 +0.4 -0.1
complex community Community=Kojac gum; Passage=4 +0.1 -0.2 -0.3 -0.4 +0.3
complex community Community=guar; Passage=4 -0.9 +0.1 +0.0 +0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 +0.3 +0.1 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 +0.4 -0.1 +0.0 -0.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.5 -0.2 -0.1 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 +1.0 -0.3 +0.2 -0.5 -0.1
complex community Community=guar; Passage=4 +0.1 -0.1 -0.2 +0.6 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 +0.9 +0.0 +0.0 +0.1
phage phage_bap4 +0.2 -0.1 +0.1 +0.5 +0.1
phage phage_bap4 +0.6 +0.1 -0.1 +0.1 +0.1
no phage control no phage control +0.8 +0.1 -0.0 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 +1.0 -0.4 +0.1 +0.3 -0.1
phage phage_bap4 +0.5 +0.1 -0.0 +0.4 -0.1
phage phage_bap4 +0.5 +0.1 -0.0 +0.6 +0.0
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