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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2977 and GFF2978 are separated by 11 nucleotides
GFF2978 and GFF2979 are separated by 40 nucleotides
GFF2979 and GFF2980 are separated by 123 nucleotides
GFF2980 and GFF2981 are separated by 67 nucleotides
GFF2977 - RND efflux system, inner membrane transporter, at 3,030,027 to 3,033,215
GFF2977
GFF2978 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 3,033,227 to 3,034,633
GFF2978
GFF2979 - Nitroreductase family protein, at 3,034,674 to 3,035,267
GFF2979
GFF2980 - hypothetical protein, at 3,035,391 to 3,035,558
GFF2980
GFF2981 - hypothetical protein, at 3,035,626 to 3,035,886
GFF2981
Group
Condition
GFF2977
GFF2978
GFF2979
GFF2980
GFF2981
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
-0.3
-1.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
-0.0
-1.3
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
-0.1
+0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.1
-0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.1
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
-0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.2
-0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.2
+0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
+0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.0
-0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.2
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
-0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
-0.2
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.0
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
+0.1
+0.8
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.2
+0.2
+0.4
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