Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2964 and GFF2965 are separated by 115 nucleotidesGFF2965 and GFF2966 are separated by 134 nucleotidesGFF2966 and GFF2967 are separated by 117 nucleotidesGFF2967 and GFF2968 are separated by 5 nucleotides GFF2964 - Sialic acid transporter (permease) NanT, at 47,989 to 49,479 GFF2964 GFF2965 - N-acetylneuraminate lyase (EC 4.1.3.3), at 49,595 to 50,488 GFF2965 GFF2966 - Transcriptional regulator NanR, at 50,623 to 51,405 GFF2966 GFF2967 - ClpXP protease specificity-enhancing factor / Stringent starvation protein B, at 51,523 to 52,023 GFF2967 GFF2968 - Stringent starvation protein A, at 52,029 to 52,667 GFF2968
Group Condition GFF2964 GFF2965 GFF2966 GFF2967 GFF2968
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI -0.2 +0.4 -0.3 -6.0 -5.0
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.4 +0.1 -0.5 -1.6 -6.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI +0.0 +0.0 -0.5 -0.6 -7.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.0 +0.3 -0.3 -1.0 -6.8
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.1 +0.3 -0.4 -0.3 -7.0
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI -0.0 +0.2 -0.6 +0.7 -7.2
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI -0.0 +0.1 -1.0 +0.7 -6.1
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI -0.1 +0.1 -0.6 +0.5 -5.3
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI +0.0 +0.0 +0.1 -0.4 -4.2
lb_plus_sm_buffer LB_plus_SM_buffer +0.1 -0.1 -0.1 -0.8 -3.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.0 +0.0 -0.6 -1.0 -2.6
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.1 +0.2 -0.9 -0.4 -2.7
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.1 +0.1 -0.7 -0.3 -2.6
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.3 +0.3 +0.0 -0.5 -3.6
lb_plus_sm_buffer LB_plus_SM_buffer -0.0 +0.1 -0.2 -0.2 -3.1
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI +0.1 -0.0 -0.2 -0.3 -2.3
nophagecontrol No phage control +0.1 +0.1 -0.1 -0.5 -1.9
nophagecontrol No phage control -0.1 +0.1 -0.0 +0.0 -2.2
phage phi19h1_phage 15 MOI -0.1 +0.0 +0.2 -0.9 -1.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.2 +0.2 -0.2 -0.0 -2.0
lb_plus_sm_buffer LB_plus_SM_buffer +0.0 +0.2 -0.3 +0.4 -1.4
phage phi19h1_phage 15 MOI -0.0 +0.2 -0.8 +0.4 -0.8
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.1 -0.1 -0.2 -0.7 +1.6
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.0 -0.2 -0.9 -0.3 +2.1
phage LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI +0.0 +0.2 -0.2 +0.9 +0.9
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.4 +0.1 -0.2 +1.4 +0.4
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI -0.1 +0.2 -0.1 +1.5 +1.3
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.0 +0.3 -0.4 +1.3 +1.6
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.1 -0.5 -0.8 +1.7 +2.7
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI -0.2 +0.1 -0.3 +1.8 +2.1
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