Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2959 and GFF2960 are separated by 3 nucleotidesGFF2960 and GFF2961 are separated by 95 nucleotidesGFF2961 and GFF2962 overlap by 4 nucleotidesGFF2962 and GFF2963 are separated by 16 nucleotides GFF2959 - TRAP-type C4-dicarboxylate transport system, large permease component, at 37,692 to 38,993 GFF2959 GFF2960 - Gluconolactonase, at 38,997 to 39,923 GFF2960 GFF2961 - putative exported protein, at 40,019 to 40,996 GFF2961 GFF2962 - Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17), at 40,993 to 41,898 GFF2962 GFF2963 - Dimethylmenaquinone methyltransferase family protein, at 41,915 to 42,625 GFF2963
Group Condition GFF2959 GFF2960 GFF2961 GFF2962 GFF2963
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 +0.0 -0.5 -0.2 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 -0.1 -0.4 +0.1 -0.6
carbon source Ying_sugar7 rep B; time point 2 -0.1 -0.2 -0.3 +0.0 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.1 +0.0 -0.2 -0.2 -0.4
carbon source Ying_Others16 rep C; time point 1 -0.2 -0.1 -0.2 -0.2 -0.2
carbon source Ying_sugar7 rep C; time point 1 +0.0 +0.0 -0.7 -0.1 -0.2
carbon source Ying_Others16 rep B; time point 2 -0.2 -0.0 -0.3 -0.1 -0.3
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 -0.0 -0.4 -0.3 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.0 -0.3 +0.0 -0.7
carbon source Ying_sugar7 rep B; time point 1 +0.1 -0.1 -0.5 -0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 +0.0 +0.4 -0.1 -1.3
carbon source Ying_sugar7 rep A; time point 1 +0.1 +0.0 -0.3 -0.3 -0.2
carbon source Ying_Others16 rep C; time point 2 -0.0 -0.1 -0.5 -0.2 +0.1
carbon source Ying_all64 rep B; time point 1 -0.1 +0.1 -0.1 -0.4 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.0 +0.1 -0.0 -0.1 -0.5
carbon source Ying_all64 rep C; time point 2 +0.1 +0.0 -0.1 +0.1 -0.6
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 -0.2 -0.4 -0.1 +0.0
carbon source Ying_all64 rep A; time point 1 -0.2 -0.0 -0.0 -0.4 +0.7
carbon source Ying_AminoAcid20 rep A; time point 1 +0.2 -0.0 -0.0 -0.4 +0.5
carbon source Ying_Others16 rep A; time point 2 +0.2 +0.2 +0.0 -0.0 -0.3
carbon source Ying_all64 rep B; time point 3 +0.1 +0.0 +0.3 +0.0 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.1 +0.5 +0.0 -0.0
carbon source Ying_sugar7 rep A; time point 2 +0.1 -0.2 +0.3 -0.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 3 -0.1 -0.2 +0.5 -0.4 +0.5
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 +0.2 +0.6 -0.3 +0.3
carbon source Ying_all64 rep C; time point 3 -0.2 +0.2 +0.7 +0.0 +0.1
carbon source Ying_sugar7 rep C; time point 3 -0.0 +0.0 +0.1 +0.1 +0.6
carbon source Ying_all64 rep A; time point 3 -0.0 -0.0 +0.5 +0.0 +0.4
carbon source Ying_sugar7 rep B; time point 3 +0.0 +0.2 +0.5 -0.2 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 +0.1 -0.1 +0.3 +0.6
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