Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2958 and GFF2959 are separated by 173 nucleotidesGFF2959 and GFF2960 overlap by 14 nucleotidesGFF2960 and GFF2961 are separated by 82 nucleotidesGFF2961 and GFF2962 overlap by 4 nucleotides GFF2958 - Putative uncharacterized protein YhcG, at 42,094 to 43,197 GFF2958 GFF2959 - Cytosine permease, at 43,371 to 44,567 GFF2959 GFF2960 - Cytosine deaminase (EC 3.5.4.1), at 44,554 to 45,834 GFF2960 GFF2961 - Putative sugar isomerase involved in processing of exogenous sialic acid, at 45,917 to 46,384 GFF2961 GFF2962 - N-acetylmannosamine kinase (EC 2.7.1.60), at 46,381 to 47,256 GFF2962
Group Condition GFF2958 GFF2959 GFF2960 GFF2961 GFF2962
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.1 -0.4 +0.1 -0.2 -0.9
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.3 -0.2 -0.4 -0.6 -0.2
micoeukaryotes C.elegans, mixed culture-2 -0.3 +0.0 -0.6 +0.2 +0.1
phage Ffm_phage 10 MOI; agar plate assay -0.5 +0.2 +0.2 -0.4 -0.0
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.1 -0.1 +0.4 -0.5 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.5 -0.2 -0.0 +0.3 +0.3
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI -0.5 +0.2 +0.1 +0.4 -0.2
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.0 +0.1 -0.6 +0.2 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.4 -0.4 +0.6 +0.1 +0.2
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.5 +0.0 -0.2 +0.2 -0.4
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.4 +0.1 +0.3 -0.1 +0.2
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.2 +0.2 -0.5 +0.1 +0.2
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 +0.1 +0.6 -0.4 -0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.2 +0.1 +0.4 -0.2 -0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.1 +0.1 +0.5 +0.1 -0.5
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.3 +0.1 +0.1 +0.3 +0.3
phage 6F2_phage 15 MOI +0.0 +0.1 +0.3 -0.3 +0.5
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.4 +0.3 +0.8 -0.5 +0.4
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.4 +0.3 +0.4 -0.2 -0.2
phage 6F2_phage 15 MOI -0.2 +0.0 +0.2 +0.2 +0.4
phage 6H2_phage 10 MOI; agar plate assay -0.1 -0.0 +0.6 -0.1 +0.3
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.4 +0.1 +0.3 +0.5 +0.4
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.2 +0.2 +0.4 +0.3 +0.2
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.2 +0.2 +0.3 +0.4 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.4 +0.2 +0.3 +0.2 +0.6
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.1 +0.3 +0.3 +0.3 +0.3
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.0 +0.3 +0.4 +0.5 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.1 +0.1 +0.1 +0.4 +0.4
lb_plus_sm_buffer LB_plus_SM_buffer -0.1 -0.0 +0.3 +0.6 +0.3
phage LB_plus_SM_buffer with 6C2_phage 15 MOI +0.0 +0.2 +0.4 +0.4 +0.2
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