Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF294 and GFF295 are separated by 22 nucleotidesGFF295 and GFF296 are separated by 10 nucleotidesGFF296 and GFF297 are separated by 3 nucleotidesGFF297 and GFF298 overlap by 4 nucleotides GFF294 - Lipid A export permease/ATP-binding protein MsbA, at 327,954 to 329,621 GFF294 GFF295 - Ribonuclease G, at 329,644 to 331,170 GFF295 GFF296 - Septum formation protein Maf, at 331,181 to 331,783 GFF296 GFF297 - FIG00978250: hypothetical protein, at 331,787 to 332,500 GFF297 GFF298 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177), at 332,497 to 332,964 GFF298
Group Condition GFF294 GFF295 GFF296 GFF297 GFF298
complex community Community=arabino-guar; Passage=4 N.D. -0.9 -0.1 -0.3 -0.9
complex community Community=guar; Passage=4 N.D. -1.5 -0.1 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 N.D. -1.4 -0.1 -0.0 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.8 -0.3 -0.2 +0.3
complex community Community=guar; Passage=4 N.D. -1.3 +0.4 +0.4 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.8 +0.4 +0.0 -0.3
complex community Community=guar; Passage=4 N.D. -0.6 +0.2 +0.1 -0.3
no phage control no phage control N.D. -0.4 -0.2 +0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.1 -0.0 -0.5
phage phage_bap4 N.D. -0.2 -0.0 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.2 -0.3 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.1 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.3 +0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 +0.0 -0.2 +0.2
phage phage_bap4 N.D. -0.2 +0.0 -0.2 +0.1
no phage control no phage control N.D. -0.2 -0.2 +0.1 +0.1
phage phage_bap4 N.D. -0.2 +0.2 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.1 -0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.3 +0.1 +0.1 +0.0
no phage control no phage control N.D. -0.3 +0.1 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.3 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.2 -0.2 +0.2 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.2 +0.2 +0.5
complex community Community=guar; Passage=4 N.D. -0.8 +0.4 +0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.3 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 -0.0 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.6 +0.3 +0.4 +0.4
complex community Community=Kojac gum; Passage=4 N.D. -0.6 +0.1 +0.4 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.3 +0.1 +0.2 +0.1
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