Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2955 and GFF2956 overlap by 4 nucleotidesGFF2956 and GFF2957 overlap by 4 nucleotidesGFF2957 and GFF2958 are separated by 4 nucleotidesGFF2958 and GFF2959 overlap by 4 nucleotides GFF2955 - hypothetical protein, at 378,753 to 380,450 GFF2955 GFF2956 - Uncharacterized protein YfaT, at 380,447 to 381,133 GFF2956 GFF2957 - UPF0192 protein YfaS, at 381,130 to 385,842 GFF2957 GFF2958 - hypothetical protein, at 385,847 to 387,583 GFF2958 GFF2959 - Uncharacterized protein YfaP, at 387,580 to 388,395 GFF2959
Group Condition GFF2955 GFF2956 GFF2957 GFF2958 GFF2959
complex community Community=guar; Passage=4 -0.1 -0.3 +0.0 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.3 -0.0 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.1 -0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.2 -0.0 -0.0 +0.2
complex community Community=guar; Passage=4 -0.4 -0.1 +0.0 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 -0.0 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 -0.3 +0.2 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.0 +0.0 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.3 +0.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 -0.1 +0.2 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 -0.3 +0.1 +0.3 -0.2
complex community Community=Kojac gum; Passage=4 -0.2 -0.3 +0.2 +0.0 +0.2
complex community Community=Locust bean gum; Passage=4 -0.3 -0.1 +0.0 +0.3 -0.0
phage phage_bap4 -0.2 +0.1 +0.1 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 +0.0 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 -0.0 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 -0.1 +0.2 +0.1
phage phage_bap4 -0.1 +0.2 +0.0 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.1 -0.1 +0.1 +0.1
complex community Community=Kojac gum; Passage=1 -0.1 +0.2 +0.1 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 +0.2 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.1 +0.0 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.3 +0.4 -0.1 +0.0 +0.2
no phage control no phage control -0.0 +0.2 +0.1 +0.1 -0.1
complex community Community=guar; Passage=4 +0.0 -0.5 -0.1 +0.4 +0.7
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.0 +0.3 -0.1
phage phage_bap4 -0.0 +0.2 +0.1 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 -0.0 +0.2 +0.5
complex community Community=Locust bean gum; Passage=4 +0.0 +0.1 +0.1 +0.2 +0.3
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