Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15110	PS417_15115	PS417_15120	PS417_15125	PS417_15135
stress	Cisplatin 0.01 mg/ml	-4.0	-5.3	-5.0	-0.0	-0.1
stress	Nalidixic 0.025 mg/ml	-0.4	-2.8	-2.8	+0.1	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	-0.4	-0.5	-0.5	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4	-1.1	-0.1	-0.5	-1.5
root	root sample 6; outgrowth in LB	-1.2	-0.6	+0.2	-2.1	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.7	-0.1	-0.8	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8	-0.6	-0.3	+0.2	-1.4
stress	Nalidixic 0.015 mg/ml	-0.0	-2.1	-2.6	-0.4	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	-0.1	-0.4	+0.6	-3.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	+0.1	-0.1	+0.6	-2.9
solid stress	Fraxetin 3 mM; solid stress	-0.7	-0.2	-0.0	+0.3	-3.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	-1.0	-0.9	-0.5	-1.2
soil	soil sample 5; outgrowth in LB	-0.8	-0.4	-0.4	-0.2	-2.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9	-1.2	-0.4	-0.2	-1.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.0	-0.7	-0.2	+0.4	-2.0
stress	Doxycycline hyclate 0.001 mg/ml	-3.5	+0.1	-0.4	+0.4	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	-0.1	+0.2	-1.8	+0.6
soil	soil sample 2; outgrowth in LB	-1.3	-0.2	-0.6	-1.3	+0.6
soil	soil sample 3; outgrowth in LB	-1.5	-0.7	+0.1	+0.9	-1.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.4	+0.6	+0.3	-0.2	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	-0.1	-0.3	-0.6	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.7	+0.4	+0.1	+0.6	-0.5
soil	soil sample 8; outgrowth in LB	-1.8	-0.0	-0.1	+0.9	-1.0
soil	soil sample 4; outgrowth in LB	-1.1	-0.3	+0.2	+1.1	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9	-0.1	-0.5	+1.0	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8	-0.3	+0.0	+0.9	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+5.1	-0.2	-0.2	-0.7	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.5	+0.1	-0.4	-0.6	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.6	-0.1	-0.0	+0.2	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.7	+0.1	-0.0	+0.4	+0.2