Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15105	PS417_15110	PS417_15115	PS417_15120	PS417_15125
stress	Cisplatin 0.01 mg/ml	-3.8	-4.0	-5.3	-5.0	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.7	-2.4	-1.1	-0.1	-0.5
stress	Doxycycline hyclate 0.001 mg/ml	-3.7	-3.5	+0.1	-0.4	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8	-2.1	-0.1	+0.2	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.0	-2.8	-0.6	-0.3	+0.2
stress	Nalidixic 0.025 mg/ml	-0.5	-0.4	-2.8	-2.8	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.7	-1.4	-0.9	+0.2	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-4.4	-2.1	+0.1	-0.1	+0.6
stress	Nalidixic 0.015 mg/ml	-0.3	-0.0	-2.1	-2.6	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.6	-1.7	-0.5	-0.2	-0.1
stress	Choline chloride 300 mM	-2.4	-2.3	-0.1	+0.0	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.3	-1.9	-0.8	+0.0	+0.1
soil	soil sample 2; outgrowth in LB	-1.3	-1.3	-0.2	-0.6	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6	-2.1	-0.1	-0.3	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	-1.1	-0.4	-0.5	-0.5
stress	Polymyxin B sulfate 0.006 mg/ml	-2.2	-2.2	+0.0	-0.1	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	-2.7	+0.4	+0.1	+0.6
root	root sample 6; outgrowth in LB	-0.0	-1.2	-0.6	+0.2	-2.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0	-1.9	-0.1	-0.5	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9	-1.5	-0.4	+0.4	-0.1
stress	Neomycin 0.04 mg/ml	-2.0	-1.9	-0.2	+0.2	+0.4
phage	P. simiae OR1 MOI 0.1	-2.4	-1.5	+0.4	+0.0	+0.2
soil	soil sample 8; outgrowth in LB	-1.5	-1.8	-0.0	-0.1	+0.9
soil	soil sample 3; outgrowth in LB	-1.1	-1.5	-0.7	+0.1	+0.9
soil	soil sample 4; outgrowth in LB	-1.6	-1.1	-0.3	+0.2	+1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.9	+2.8	+0.0	+0.0	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+3.9	+4.5	+0.1	-0.4	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+5.3	+5.1	-0.2	-0.2	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.9	+4.6	-0.1	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.7	+4.7	+0.1	-0.0	+0.4