Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01490	PS417_01495	PS417_01500	PS417_01505	PS417_01510
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.1	-0.7	+0.2	-3.2
carbon source	2'-Deoxyinosine 5 mM (C)	-1.0	-0.2	-0.1	-0.2	-1.7
stress	R2A with Fusaric 120 ug/mL	-0.1	-1.7	-0.2	-0.1	-0.2
carbon source	Carbon source L-Citrulline 10 mM	-1.2	-0.5	-0.5	-0.0	-0.1
stress	R2A with Fusaric 120 ug/mL	+0.1	-1.7	-0.1	-0.1	-0.3
stress	R2A with Fusaric 120 ug/mL	-0.0	-1.7	-0.4	+0.0	-0.1
phage	P. simiae OR Antrim MOI 10	+0.1	-0.1	-0.3	+0.1	-1.9
stress	R2A with Fusaric 120 ug/mL	-0.3	-1.5	-0.3	-0.2	+0.2
carbon source	Carbon source L-Citrulline 5 mM	-0.6	-0.8	-0.5	+0.2	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.2	+0.1	-0.3	-0.2	-1.4
stress	Thallium(I) acetate 0.0625 mg/ml	-0.7	-0.6	-0.7	+0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.1	-0.6	-0.2	-1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	+0.2	-0.2	+0.0	-1.7
carbon source	Carbon source L-Citrulline 5 mM	-0.7	-0.7	-0.4	+0.2	+0.0
stress	R2A with Fusaric 120 ug/mL	+0.0	-1.6	-0.3	-0.1	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.2	-0.4	-0.3	-1.1
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.3	+0.1	-0.5	+0.4	-1.9
phage	P. simiae ORA MOI 10	+0.3	+0.1	-0.3	+0.1	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.4	-0.0	+0.3	-0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.4	+0.1	+0.1	+0.1	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6	-0.4	-0.2	+0.4	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.2	-0.3	-0.5	+1.0
soil	soil sample 4; outgrowth in LB	-0.3	-0.0	-0.7	+0.3	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.1	+0.2	-0.7	+1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+0.0	-0.6	-0.1	+1.0
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.0	+0.4	-0.5	-0.1	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.1	-0.2	-0.1	-0.1	+0.5
soil	soil sample 3; outgrowth in LB	+0.8	-0.3	+0.1	+0.1	+0.6
carbon source	L-Valine (C)	+0.8	+1.1	+0.4	+2.9	-2.0
carbon source	L-Valine (C)	+0.2	+0.2	+0.2	+2.9	+0.7