Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2933 and GFF2934 are separated by 1 nucleotidesGFF2934 and GFF2935 are separated by 28 nucleotidesGFF2935 and GFF2936 are separated by 85 nucleotidesGFF2936 and GFF2937 are separated by 19 nucleotides GFF2933 - Transcriptional regulator, AraC family, at 16,637 to 17,326 GFF2933 GFF2934 - Lipoate synthase, at 17,328 to 18,344 GFF2934 GFF2935 - Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase, at 18,373 to 19,065 GFF2935 GFF2936 - Proposed lipoate regulatory protein YbeD, at 19,151 to 19,435 GFF2936 GFF2937 - D-alanine aminotransferase (EC 2.6.1.21), at 19,455 to 20,339 GFF2937
Group Condition GFF2933 GFF2934 GFF2935 GFF2936 GFF2937
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 N.D. N.D. -3.4 -0.0
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 N.D. N.D. -3.4 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 N.D. N.D. -3.1 +0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 N.D. N.D. -3.1 +0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -0.0 N.D. N.D. -2.7 -0.0
carbon source Ying_all64 rep B; time point 3 -0.2 N.D. N.D. -2.6 +0.1
carbon source Ying_all64 rep A; time point 3 -0.0 N.D. N.D. -2.4 +0.1
carbon source Ying_all64 rep A; time point 2 +0.1 N.D. N.D. -2.4 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.0 N.D. N.D. -2.2 +0.0
carbon source Ying_AminoAcid20 rep C; time point 1 -0.3 N.D. N.D. -1.6 -0.0
carbon source Ying_all64 rep B; time point 2 +0.0 N.D. N.D. -1.8 -0.1
carbon source Ying_all64 rep C; time point 1 -0.3 N.D. N.D. -1.4 -0.0
carbon source Ying_Others16 rep A; time point 2 -0.2 N.D. N.D. -1.4 -0.1
carbon source Ying_all64 rep A; time point 1 +0.0 N.D. N.D. -1.4 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.2 N.D. N.D. -1.1 -0.1
carbon source Ying_Others16 rep C; time point 3 +0.1 N.D. N.D. -1.2 -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -0.2 N.D. N.D. -1.1 +0.0
carbon source Ying_Others16 rep B; time point 2 -0.0 N.D. N.D. -0.9 -0.2
carbon source Ying_AminoAcid20 rep A; time point 1 +0.4 N.D. N.D. -1.2 -0.2
carbon source Ying_sugar7 rep B; time point 3 +0.2 N.D. N.D. -1.0 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.0 N.D. N.D. -0.8 +0.1
carbon source Ying_Others16 rep C; time point 2 +0.2 N.D. N.D. -1.0 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.0 N.D. N.D. -0.9 +0.1
carbon source Ying_all64 rep B; time point 1 +0.3 N.D. N.D. -1.1 +0.0
carbon source Ying_Others16 rep A; time point 1 +0.2 N.D. N.D. -0.9 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 N.D. N.D. -0.8 +0.3
carbon source Ying_Nucleobase14 rep B; time point 1 -0.2 N.D. N.D. -0.7 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.3 N.D. N.D. -0.6 +0.3
carbon source Ying_all64 rep C; time point 2 +0.1 N.D. N.D. +1.4 +0.1
carbon source Ying_Others16 rep A; time point 3 -0.1 N.D. N.D. +2.4 +0.4
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