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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2932 and GFF2933 overlap by 4 nucleotides
GFF2933 and GFF2934 are separated by 24 nucleotides
GFF2934 and GFF2935 overlap by 4 nucleotides
GFF2935 and GFF2936 are separated by 0 nucleotides
GFF2932 - Uncharacterized protein YeaG, at 358,866 to 360,788
GFF2932
GFF2933 - no description, at 360,785 to 360,904
GFF2933
GFF2934 - FIG002076: hypothetical protein, at 360,929 to 362,221
GFF2934
GFF2935 - FIG004684: SpoVR-like protein, at 362,218 to 363,741
GFF2935
GFF2936 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 363,742 to 364,182
GFF2936
Group
Condition
GFF2932
GFF2933
GFF2934
GFF2935
GFF2936
complex community
Community=guar; Passage=4
-0.2
N.D.
-0.4
-0.3
-1.6
complex community
Community=arabino-guar; Passage=4
-0.1
N.D.
-0.1
-0.2
-1.9
complex community
Community=Locust bean gum; Passage=4
-0.2
N.D.
-0.2
-0.4
-1.5
complex community
Community=Locust bean gum; Passage=4
-0.3
N.D.
-0.4
-0.6
-0.9
complex community
Community=guar; Passage=4
-0.1
N.D.
-0.2
-0.1
-1.6
complex community
Community=Kojac gum; Passage=4
-0.2
N.D.
-0.1
-0.2
-1.5
complex community
Community=guar; Passage=4
-0.2
N.D.
-0.2
-0.4
-1.2
complex community
Community=Locust bean gum; Passage=4
-0.3
N.D.
-0.2
-0.3
-0.8
complex community
Community=arabino-guar; Passage=4
-0.2
N.D.
-0.2
-0.4
-0.7
complex community
Community=Locust bean gum; Passage=4
-0.3
N.D.
-0.3
-0.4
-0.3
phage
phage_bap4
-0.0
N.D.
-0.1
-0.1
-0.6
complex community
Community=arabino-guar; Passage=4
-0.0
N.D.
-0.2
-0.0
-0.6
no phage control
no phage control
-0.1
N.D.
-0.0
-0.1
-0.6
no phage control
no phage control
-0.0
N.D.
-0.0
+0.0
-0.7
complex community
Community=guar; Passage=4
-0.1
N.D.
-0.3
-0.2
-0.2
phage
phage_bap4
-0.0
N.D.
-0.1
-0.0
-0.6
no phage control
no phage control
-0.0
N.D.
-0.1
-0.0
-0.6
complex community
Community=arabino-guar; Passage=4
+0.1
N.D.
-0.3
-0.1
-0.3
no phage control
no phage control
-0.0
N.D.
-0.2
+0.0
-0.4
phage
phage_bap4
-0.0
N.D.
-0.2
-0.0
-0.4
phage
phage_bap4
-0.1
N.D.
-0.0
-0.0
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
+0.1
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
N.D.
+0.2
+0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
N.D.
+0.2
+0.3
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
N.D.
+0.2
+0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.1
N.D.
+0.2
+0.1
+0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.1
N.D.
+0.1
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
N.D.
+0.2
+0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
N.D.
+0.4
+0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
N.D.
+0.2
+0.2
+0.3
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