Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2929 and GFF2930 overlap by 32 nucleotidesGFF2930 and GFF2931 overlap by 4 nucleotidesGFF2931 and GFF2932 overlap by 4 nucleotidesGFF2932 and GFF2933 are separated by 103 nucleotides GFF2929 - Sugar transport PTS system IIa component, at 13,148 to 13,594 GFF2929 GFF2930 - Phosphotransferase system, phosphocarrier protein HPr, at 13,563 to 13,832 GFF2930 GFF2931 - Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9), at 13,829 to 15,583 GFF2931 GFF2932 - putative membrane protein, at 15,580 to 16,533 GFF2932 GFF2933 - Transcriptional regulator, AraC family, at 16,637 to 17,326 GFF2933
Group Condition GFF2929 GFF2930 GFF2931 GFF2932 GFF2933
carbon source Ying_Others16 rep B; time point 3 N.D. N.D. -2.4 +0.0 -0.2
carbon source Ying_sugar7 rep A; time point 3 N.D. N.D. -2.5 -0.0 +0.2
carbon source Ying_sugar7 rep C; time point 3 N.D. N.D. -2.2 +0.1 -0.1
carbon source Ying_sugar7 rep B; time point 2 N.D. N.D. -2.1 +0.1 -0.1
carbon source Ying_sugar7 rep C; time point 2 N.D. N.D. -1.8 -0.1 +0.0
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. N.D. -1.6 -0.1 -0.1
carbon source Ying_sugar7 rep A; time point 2 N.D. N.D. -1.9 +0.0 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. N.D. -1.6 -0.1 +0.0
carbon source Ying_sugar7 rep B; time point 1 N.D. N.D. -1.3 -0.0 -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. N.D. -1.3 -0.1 -0.1
carbon source Ying_sugar7 rep A; time point 1 N.D. N.D. -1.4 +0.1 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. N.D. -1.3 +0.0 -0.2
carbon source Ying_sugar7 rep C; time point 1 N.D. N.D. -1.4 +0.0 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. N.D. -1.1 -0.0 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. N.D. -1.4 -0.1 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. N.D. -1.2 +0.0 -0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. N.D. -1.1 -0.1 +0.0
carbon source Ying_all64 rep A; time point 3 N.D. N.D. -0.9 -0.0 -0.0
carbon source Ying_Others16 rep A; time point 2 N.D. N.D. -0.7 -0.1 -0.2
carbon source Ying_Others16 rep B; time point 2 N.D. N.D. -0.8 -0.0 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 N.D. N.D. -0.9 -0.1 +0.0
carbon source Ying_Others16 rep C; time point 3 N.D. N.D. -0.9 -0.0 +0.1
carbon source Ying_sugar7 rep B; time point 3 N.D. N.D. -0.8 -0.2 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. N.D. -0.9 +0.1 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. N.D. -0.8 +0.1 +0.0
carbon source Ying_Others16 rep C; time point 2 N.D. N.D. -0.7 +0.0 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 1 N.D. N.D. -0.6 +0.0 +0.3
carbon source Ying_all64 rep B; time point 1 N.D. N.D. -0.6 +0.2 +0.3
carbon source Ying_all64 rep C; time point 2 N.D. N.D. +2.5 -0.1 +0.1
carbon source Ying_all64 rep C; time point 3 N.D. N.D. +2.4 -0.0 +0.2
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