Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_14960	PS417_14965	PS417_14970	PS417_14975	PS417_14980
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.8	-5.4	-0.5	-0.3	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.0	-4.9	-0.8	-0.5	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.3	-3.6	-0.5	-0.5	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.7	-3.6	-0.5	+0.3	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.3	-3.5	-0.8	+0.0	+0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-3.4	-3.1	-0.5	+0.5	+0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.7	-2.3	-0.3	-0.5	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.9	-2.2	-0.5	+0.2	-1.4
stress	Polymyxin B sulfate 0.006 mg/ml	-2.7	-1.4	-0.5	-0.4	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.4	-2.0	-0.6	+0.4	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.7	-2.4	-0.4	+0.2	+0.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.1	-1.9	-0.4	-0.4	+0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.2	-2.4	-0.6	+0.7	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.6	-0.4	+0.4	-2.5
stress	Gentamicin 0.008 mg/ml	-1.3	-0.3	-0.0	-0.3	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.0	-0.1	-0.2	-0.4	-2.1
stress	Doxycycline hyclate 0.001 mg/ml	-1.5	+0.2	-0.4	-0.4	-0.3
stress	Neomycin 0.04 mg/ml	-1.5	-0.5	-0.1	+0.1	-0.3
carbon source	L-Valine (C)	+0.1	-0.0	-0.0	+0.5	-2.8
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	+0.2	-0.2	-0.4	-1.5
liquid stress	80% Methanol 3 mM; liquid stress	-0.1	+0.1	+0.3	-0.4	-2.1
phage	JP1 MOI 10	+0.2	-0.2	+0.1	+0.1	-2.2
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.0	+0.2	+0.1	-0.2	-2.1
stress	Lomefloxacin 0.0001 mM	-0.8	+0.1	-0.2	+0.4	-1.2
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.3	+0.2	+0.1	+0.4	-1.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4	-0.4	+0.5	-0.2	-1.1
carbon source	L-Valine (C)	-0.2	+0.5	+0.3	+0.5	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.1	+0.2	-0.9	+1.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	-0.3	-0.2	-0.5	+1.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+1.2	-0.2	+0.8	+0.5