Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2912 and GFF2913 overlap by 4 nucleotidesGFF2913 and GFF2914 overlap by 17 nucleotidesGFF2914 and GFF2915 are separated by 56 nucleotidesGFF2915 and GFF2916 are separated by 14 nucleotides GFF2912 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 339,993 to 340,742 GFF2912 GFF2913 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 340,739 to 341,395 GFF2913 GFF2914 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 341,379 to 342,107 GFF2914 GFF2915 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 342,164 to 342,958 GFF2915 GFF2916 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 342,973 to 343,794 GFF2916
Group Condition GFF2912 GFF2913 GFF2914 GFF2915 GFF2916
complex community Community=arabino-guar; Passage=4 -0.2 -1.4 -0.4 N.D. -0.4
complex community Community=arabino-guar; Passage=4 +0.3 -2.0 +0.4 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.5 -0.5 +0.1 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 -0.2 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.1 -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.7 -0.1 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 +0.1 -0.4 -0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.3 -0.3 N.D. -0.2
complex community Community=guar; Passage=4 -0.0 -0.7 +0.9 N.D. -0.8
complex community Community=Locust bean gum; Passage=4 +0.3 -1.0 -0.3 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.6 +0.3 N.D. -0.2
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 -0.4 N.D. -0.4
complex community Community=guar; Passage=4 +0.1 -1.3 +0.4 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 -0.5 N.D. -0.4
phage phage_bap4 -0.2 +0.5 -0.5 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.2 +0.2 N.D. -0.3
complex community Community=Locust bean gum; Passage=1 +0.1 -0.9 +0.4 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.0 -0.4 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.3 -0.1 N.D. -0.4
complex community Community=Kojac gum; Passage=4 -0.4 +0.4 +0.4 N.D. -0.5
phage phage_bap4 +0.0 +0.6 -0.3 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.6 -0.3 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.4 N.D. -0.1
phage phage_bap4 +0.2 +0.5 +0.1 N.D. -0.3
phage phage_bap4 +0.1 +0.5 +0.0 N.D. -0.2
complex community Community=Kojac gum; Passage=1 +0.1 +0.3 +0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.5 +0.3 N.D. +0.0
phage phage_bap4 +0.2 +0.6 +0.1 N.D. -0.1
phage phage_bap4 +0.0 +0.4 +0.5 N.D. +0.0
complex community Community=guar; Passage=4 +0.2 -0.3 +0.8 N.D. +0.2
remove
GFF2912
plot		 remove
GFF2913
plot		 remove
GFF2914		 remove
GFF2915
plot		 remove
GFF2916
plot