Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2902 and GFF2904 are separated by 106 nucleotidesGFF2904 and GFF2905 are separated by 213 nucleotidesGFF2905 and GFF2906 are separated by 767 nucleotidesGFF2906 and GFF2907 are separated by 13 nucleotides GFF2902 - ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes), at 328,333 to 329,859 GFF2902 GFF2904 - hypothetical protein, at 329,966 to 330,697 GFF2904 GFF2905 - surface antigen gene, at 330,911 to 332,317 GFF2905 GFF2906 - 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26), at 333,085 to 334,521 GFF2906 GFF2907 - Glucarate dehydratase (EC 4.2.1.40), at 334,535 to 335,893 GFF2907
Group Condition GFF2902 GFF2904 GFF2905 GFF2906 GFF2907
complex community Community=arabino-guar; Passage=4 -0.3 -0.5 -0.2 +0.1 -0.7
complex community Community=arabino-guar; Passage=4 +0.3 +0.4 +0.0 -0.1 -1.7
complex community Community=guar; Passage=4 -0.3 +0.2 -0.8 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 -0.2 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.0 -0.0 -0.1 -0.6
phage phage_bap4 -0.2 -0.1 +0.0 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.1 +0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.1 +0.0 -0.7
complex community Community=guar; Passage=4 +0.1 +0.2 -0.0 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 -0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.0 +0.0 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 +0.1 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 +0.2 +0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.2 +0.1 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.0 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 -0.1 +0.2 -0.2
complex community Community=guar; Passage=4 +0.1 -0.2 -0.5 +0.2 +0.3
phage phage_bap4 +0.1 +0.1 +0.0 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 +0.2 +0.1 +0.2
complex community Community=guar; Passage=4 +0.1 -0.4 -0.1 +0.0 +0.7
phage phage_bap4 +0.0 +0.1 +0.1 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 +0.3 -0.2 -0.0 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.0 +0.2 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.1 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.3 +0.4 -0.1
phage phage_bap4 +0.2 +0.2 -0.2 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.2 +0.1 +0.2 +0.4
complex community Community=Kojac gum; Passage=4 +0.1 +0.1 -0.1 -0.1 +0.9
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 +0.3 +0.2 +0.6
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