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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2895 and GFF2896 are separated by 146 nucleotides
GFF2896 and GFF2897 are separated by 28 nucleotides
GFF2897 and GFF2898 are separated by 25 nucleotides
GFF2898 and GFF2899 are separated by 34 nucleotides
GFF2895 - Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82), at 320,648 to 321,766
GFF2895
GFF2896 - Methionine synthase II (cobalamin-independent), at 321,913 to 323,034
GFF2896
GFF2897 - Glutathione S-transferase-like( EC:2.5.1.18 ), at 323,063 to 323,737
GFF2897
GFF2898 - Cardiolipin synthase, bacterial type ClsA, at 323,763 to 325,145
GFF2898
GFF2899 - no description, at 325,180 to 325,323
GFF2899
Group
Condition
GFF2895
GFF2896
GFF2897
GFF2898
GFF2899
complex community
Community=Locust bean gum; Passage=4
-0.2
+0.2
-0.3
-0.2
-0.8
complex community
Community=Kojac gum; Passage=4
-0.4
-0.2
+0.3
-0.1
-0.7
complex community
Community=guar; Passage=4
-0.5
-0.0
-0.1
+0.1
-0.5
complex community
Community=arabino-guar; Passage=4
-0.1
-0.4
+0.6
-0.3
-0.8
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.0
-0.1
+0.1
-0.9
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
-0.1
-0.1
-0.1
-0.3
complex community
Community=guar; Passage=4
+0.4
+0.0
-0.0
-0.1
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.3
-0.2
+0.1
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.3
-0.0
-0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.0
-0.2
+0.4
-0.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.0
-0.0
+0.1
-0.4
phage
phage_bap4
-0.1
+0.1
-0.1
+0.1
-0.2
complex community
Community=arabino-guar; Passage=4
-0.4
-0.1
+0.7
+0.1
-0.6
phage
phage_bap4
+0.1
+0.0
+0.1
-0.1
-0.3
complex community
Community=guar; Passage=4
-0.1
-0.0
+0.4
+0.3
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.1
-0.2
-0.2
+0.2
phage
phage_bap4
+0.2
+0.1
-0.0
-0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.1
+0.0
-0.0
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-0.0
-0.2
-0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.0
-0.2
-0.0
+0.6
phage
phage_bap4
+0.1
-0.2
+0.2
-0.3
+0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.0
-0.1
-0.2
+0.3
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.1
-0.0
+0.2
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.0
-0.1
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
+0.1
+0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.0
-0.1
-0.0
+0.7
complex community
Community=guar; Passage=4
+0.3
-0.4
+0.5
-0.4
+0.7
complex community
Community=arabino-guar; Passage=4
+0.2
-0.3
+0.2
+0.0
+0.6
complex community
Community=arabino-guar; Passage=4
+0.2
-0.1
-0.0
+0.0
+0.8
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.2
+0.0
+0.3
+0.8
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