Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2893 and GFF2894 are separated by 41 nucleotidesGFF2894 and GFF2895 overlap by 4 nucleotidesGFF2895 and GFF2896 are separated by 146 nucleotidesGFF2896 and GFF2897 are separated by 28 nucleotides GFF2893 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 318,841 to 319,827 GFF2893 GFF2894 - Transcriptional regulator, GntR family, at 319,869 to 320,651 GFF2894 GFF2895 - Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82), at 320,648 to 321,766 GFF2895 GFF2896 - Methionine synthase II (cobalamin-independent), at 321,913 to 323,034 GFF2896 GFF2897 - Glutathione S-transferase-like( EC:2.5.1.18 ), at 323,063 to 323,737 GFF2897
Group Condition GFF2893 GFF2894 GFF2895 GFF2896 GFF2897
complex community Community=Locust bean gum; Passage=4 +0.1 -1.9 -0.2 +0.2 -0.3
complex community Community=guar; Passage=4 -0.1 -1.4 -0.5 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.9 -0.0 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -1.0 -0.0 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.5 -0.1 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.6 -0.0 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -1.2 +0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.6 +0.0 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.7 +0.2 -0.1 +0.1
phage phage_bap4 -0.1 -0.8 +0.1 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.2 +0.1 -0.2 +0.0
phage phage_bap4 +0.2 -1.0 +0.0 -0.0 +0.3
phage phage_bap4 -0.1 -0.5 +0.1 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.2 +0.1 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 -1.0 +1.1 -0.4 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 -0.0 -0.3 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 -0.0 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.4 -0.2 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.5 -0.1 -0.4 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.2 +0.2 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.5 -0.1 +0.0 -0.0
complex community Community=guar; Passage=4 +0.2 -0.3 +0.3 -0.4 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.5 +0.0 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.3 +0.7 +0.1 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.7 +0.1 -0.1 -0.1
complex community Community=guar; Passage=4 +0.6 -0.4 -0.1 -0.0 +0.4
complex community Community=Locust bean gum; Passage=1 +0.3 +0.3 +0.1 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 +0.8 +0.2 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.1 +0.7 -0.4 -0.1 +0.7
complex community Community=arabino-guar; Passage=4 -0.2 +1.4 +0.2 -0.3 +0.2
remove
GFF2893
plot
remove
GFF2894
plot
remove
GFF2895
remove
GFF2896
plot
remove
GFF2897
plot