Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2891 and GFF2892 are separated by 142 nucleotidesGFF2892 and GFF2893 are separated by 166 nucleotidesGFF2893 and GFF2894 are separated by 41 nucleotidesGFF2894 and GFF2895 overlap by 4 nucleotides GFF2891 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 316,487 to 317,359 GFF2891 GFF2892 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 317,502 to 318,674 GFF2892 GFF2893 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 318,841 to 319,827 GFF2893 GFF2894 - Transcriptional regulator, GntR family, at 319,869 to 320,651 GFF2894 GFF2895 - Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82), at 320,648 to 321,766 GFF2895
Group Condition GFF2891 GFF2892 GFF2893 GFF2894 GFF2895
complex community Community=Locust bean gum; Passage=4 -0.3 -0.7 +0.1 -1.9 -0.2
complex community Community=guar; Passage=4 -0.2 -0.3 -0.1 -1.4 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.1 -0.3 -1.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 -0.1 -0.9 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.3 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.1 -0.3 -0.7 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 +0.2 -1.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.2 -0.5 -0.1
phage phage_bap4 -0.2 -0.3 -0.1 -0.5 +0.1
phage phage_bap4 -0.0 -0.1 +0.2 -1.0 +0.0
phage phage_bap4 -0.1 +0.0 -0.1 -0.8 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 +0.0 -0.6 -0.0
phage phage_bap4 -0.1 +0.0 -0.2 -0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.2 -0.3 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.2 +0.0 -0.4 +0.1
complex community Community=Kojac gum; Passage=4 -0.1 -0.0 -1.0 +1.1 -0.4
complex community Community=guar; Passage=4 -0.2 -0.3 +0.2 -0.3 +0.3
phage phage_bap4 +0.1 +0.2 +0.1 -0.5 +0.0
complex community Community=guar; Passage=4 +0.1 -0.3 +0.6 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.2 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.0 -0.2 +0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 -0.3 +0.5 -0.1
complex community Community=guar; Passage=4 -0.2 -0.2 +0.1 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 -0.2 +0.2 -0.1 +0.7 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 -0.2 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 -0.3 +0.7 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.1 -0.2 +0.7 +0.1
complex community Community=Locust bean gum; Passage=1 +0.2 +0.0 +0.3 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 -0.1 +0.8 +0.2
complex community Community=arabino-guar; Passage=4 +0.0 -0.2 -0.2 +1.4 +0.2
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