Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2885 and GFF2886 are separated by 144 nucleotidesGFF2886 and GFF2887 overlap by 4 nucleotidesGFF2887 and GFF2888 are separated by 7 nucleotidesGFF2888 and GFF2889 overlap by 8 nucleotides GFF2885 - Transcriptional regulator, LysR family, at 311,351 to 312,253 GFF2885 GFF2886 - Metallo-beta-lactamase superfamily protein PA0057, at 312,398 to 313,297 GFF2886 GFF2887 - Thioredoxin-like protein clustered with PA0057, at 313,294 to 314,025 GFF2887 GFF2888 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 314,033 to 314,737 GFF2888 GFF2889 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 314,730 to 315,491 GFF2889
Group Condition GFF2885 GFF2886 GFF2887 GFF2888 GFF2889
complex community Community=arabino-guar; Passage=4 -0.8 -0.2 -0.4 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 -0.2 -0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.1 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.2 +0.0 -0.3 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 -0.0 -0.1 N.D.
complex community Community=guar; Passage=4 -0.1 +0.1 -0.2 -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 -0.5 -0.2 -0.1 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.2 +0.1 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 -0.7 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.1 -0.1 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 +0.2 -0.5 N.D.
complex community Community=guar; Passage=4 +0.5 -0.2 -0.2 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.2 -0.1 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 +0.1 -0.1 +0.4 N.D.
complex community Community=guar; Passage=4 +0.2 +0.1 -0.2 -0.3 N.D.
phage phage_bap4 +0.4 -0.0 +0.0 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.2 +0.1 N.D.
phage phage_bap4 +0.2 +0.0 +0.3 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 +0.1 +0.3 N.D.
phage phage_bap4 +0.5 +0.1 -0.2 -0.0 N.D.
phage phage_bap4 +0.2 -0.2 +0.1 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 +0.1 +0.5 N.D.
no phage control no phage control +0.2 -0.1 +0.1 +0.4 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 +0.1 +0.5 N.D.
complex community Community=guar; Passage=4 +0.6 -0.0 -0.0 +0.2 N.D.
phage phage_bap4 +0.4 -0.0 -0.0 +0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 +0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.4 +0.1 +0.2 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 -0.2 +1.2 N.D.
complex community Community=Kojac gum; Passage=4 +0.7 +0.5 -0.2 +0.5 N.D.
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