Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2879 and GFF2880 are separated by 105 nucleotidesGFF2880 and GFF2881 are separated by 19 nucleotidesGFF2881 and GFF2882 are separated by 123 nucleotidesGFF2882 and GFF2883 are separated by 51 nucleotides GFF2879 - RNA polymerase sigma factor RpoD, at 303,117 to 305,447 GFF2879 GFF2880 - Multidrug resistance transporter, Bcr/CflA family, at 305,553 to 306,788 GFF2880 GFF2881 - Putative transmembrane protein, at 306,808 to 307,935 GFF2881 GFF2882 - BUG/TctC family periplasmic protein, at 308,059 to 309,048 GFF2882 GFF2883 - CaiB/BaiF family protein, at 309,100 to 310,305 GFF2883
Group Condition GFF2879 GFF2880 GFF2881 GFF2882 GFF2883
phage phage_bap4 N.D. -0.3 -0.3 -0.1 -0.0
phage phage_bap4 N.D. -0.2 -0.4 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.0 -0.4 -0.1
phage phage_bap4 N.D. -0.2 -0.2 -0.3 +0.0
phage phage_bap4 N.D. -0.0 +0.0 -0.5 +0.0
phage phage_bap4 N.D. -0.1 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 -0.4 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.0 -0.6 -0.1 +0.2
complex community Community=guar; Passage=4 N.D. -0.2 +0.1 -0.3 -0.1
no phage control no phage control N.D. -0.2 -0.0 -0.2 +0.1
no phage control no phage control N.D. -0.1 -0.2 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.1 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 -0.1 -0.1 +0.0
phage phage_bap4 N.D. -0.2 +0.0 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.1 -0.2 -0.0
complex community Community=guar; Passage=4 N.D. -0.1 +0.1 -0.1 -0.1
complex community Community=guar; Passage=4 N.D. -0.1 -0.0 -0.2 +0.2
phage phage_bap4 N.D. +0.0 +0.1 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 -0.1 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.1 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.2 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.0 +0.1 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.1 +0.4 -0.1
complex community Community=Locust bean gum; Passage=1 N.D. -0.0 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.1 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 N.D. +0.4 -0.0 +0.3 +0.3
complex community Community=guar; Passage=4 N.D. -0.1 +0.5 +0.2 +0.4
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