Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01460	PS417_01465	PS417_01470	PS417_01475	PS417_01480
phage	JP1 MOI 1	N.D.	-0.6	-0.3	-0.1	-0.4
seeds	Growth on radish seeds for 72 hours	N.D.	-0.3	+0.1	-1.0	-0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.6	-0.2	-0.3	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.7	-0.2	+0.2	-0.2
phage	P. simiae OR1 MOI 0.1	N.D.	+0.6	-0.3	-1.2	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.3	+0.0	-0.5	-0.7
supernatant control	Vogels_fungal_media 0.1X	N.D.	+0.1	-0.5	+0.4	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.1	+0.1	+0.4	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	+0.3	-0.8	+0.4
carbon source	L-Valine (C)	N.D.	+0.4	-0.4	-0.6	+0.2
seeds	Growth on radish seeds for 24 hours	N.D.	-0.2	-0.2	+0.4	-0.4
carbon source	L-Alanine (C)	N.D.	+0.2	-0.2	+0.3	-0.4
seeds	Growth on radish seeds for 72 hours	N.D.	-0.6	-0.3	+0.5	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.1	-0.5	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.7	-0.1	-0.0	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	+0.4	+0.2	-0.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	+0.3	-0.4	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	-0.2	+0.1	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	+0.2	-0.1	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	N.D.	+0.5	-0.1	-0.4	+0.3
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	+0.5	-0.2	-0.4	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.5	+0.2	+0.1	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.9	+0.0	-0.2	-0.2
carbon source	Carbon source L-Citrulline 5 mM	N.D.	-0.1	+0.3	+0.6	-0.2
motility	outer cut, LB soft agar motility assay	N.D.	+0.4	+0.3	+0.3	-0.4
soil	soil sample 2; outgrowth in LB	N.D.	+0.5	+0.3	-0.2	+0.1
supernatant control	Vogels_fungal_media 0.1X	N.D.	+0.7	-0.2	+0.2	+0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.9	+0.2	-0.0	-0.0
phage	P. simiae OR Antrim MOI 1	N.D.	+0.6	+0.1	+0.3	+0.3
phage	P. simiae ORA MOI 0.1	N.D.	+0.4	+0.1	+0.6	+0.3