Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2876 and GFF2877 are separated by 24 nucleotidesGFF2877 and GFF2878 are separated by 171 nucleotidesGFF2878 and GFF2879 overlap by 17 nucleotidesGFF2879 and GFF2880 are separated by 148 nucleotides GFF2876 - Putative drug efflux protein, at 463,870 to 465,081 GFF2876 GFF2877 - Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274), at 465,106 to 465,918 GFF2877 GFF2878 - Two-component response regulator, at 466,090 to 467,001 GFF2878 GFF2879 - Two-component hybrid sensor and regulator, at 466,985 to 470,410 GFF2879 GFF2880 - Urea ABC transporter, urea binding protein, at 470,559 to 471,836 GFF2880
Group Condition GFF2876 GFF2877 GFF2878 GFF2879 GFF2880
carbon source Ying_all64 rep C; time point 3 -0.3 -1.5 +0.1 -0.5 +0.1
carbon source Ying_Others16 rep B; time point 3 -0.4 -0.6 +0.2 -0.2 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.1 -0.0 +0.2 -0.1 +0.0
carbon source Ying_Others16 rep A; time point 1 -0.7 +0.2 +0.0 -0.1 -0.2
carbon source Ying_all64 rep B; time point 3 -0.1 -0.7 +0.2 -0.1 +0.0
carbon source Ying_all64 rep B; time point 2 -0.5 +0.2 -0.2 -0.1 -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 -0.7 +0.2 +0.2 -0.3 +0.2
carbon source Ying_Others16 rep C; time point 2 -0.4 +0.6 -0.1 +0.1 -0.1
carbon source Ying_Others16 rep B; time point 1 -0.8 +1.1 -0.1 -0.2 -0.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.4 +0.7 -0.0 -0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.4 +0.7 -0.2 -0.2 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.4 +0.5 +0.1 -0.0 +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.5 +0.7 -0.2 +0.1 +0.1
carbon source Ying_sugar7 rep C; time point 2 -0.6 +0.7 -0.0 +0.1 +0.1
carbon source Ying_AminoAcid20 rep A; time point 1 -0.4 +0.9 -0.1 -0.1 +0.1
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 +0.6 +0.3 -0.1 -0.1
carbon source Ying_all64 rep B; time point 1 -0.4 +0.8 +0.1 -0.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 1 -0.5 +0.7 +0.1 +0.1 +0.0
carbon source Ying_sugar7 rep A; time point 1 -0.7 +1.0 +0.2 -0.0 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.4 +0.8 +0.3 -0.1 +0.1
carbon source Ying_sugar7 rep B; time point 1 -0.2 +0.9 +0.3 -0.2 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 -0.2 +0.7 +0.4 -0.0 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.2 +0.6 +0.1 +0.1 +0.1
carbon source Ying_Others16 rep A; time point 2 -0.1 +0.7 +0.1 +0.0 +0.2
carbon source Ying_all64 rep C; time point 1 +0.1 +1.2 +0.1 -0.3 -0.1
carbon source Ying_all64 rep A; time point 1 -0.3 +1.1 +0.5 -0.0 -0.2
carbon source Ying_all64 rep C; time point 2 -0.4 +1.2 +0.1 -0.2 +0.4
carbon source Ying_Others16 rep B; time point 2 -0.3 +1.0 +0.3 +0.1 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.2 +1.3 +0.0 +0.0 +0.1
carbon source Ying_Others16 rep C; time point 1 -0.2 +0.9 +0.5 +0.2 +0.0
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