Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2874 and GFF2875 are separated by 2 nucleotidesGFF2875 and GFF2876 are separated by 100 nucleotidesGFF2876 and GFF2877 are separated by 24 nucleotidesGFF2877 and GFF2878 are separated by 171 nucleotides GFF2874 - Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1), at 462,118 to 462,873 GFF2874 GFF2875 - Transcriptional regulator, LysR family, at 462,876 to 463,769 GFF2875 GFF2876 - Putative drug efflux protein, at 463,870 to 465,081 GFF2876 GFF2877 - Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274), at 465,106 to 465,918 GFF2877 GFF2878 - Two-component response regulator, at 466,090 to 467,001 GFF2878
Group Condition GFF2874 GFF2875 GFF2876 GFF2877 GFF2878
carbon source Ying_all64 rep C; time point 3 N.D. -0.1 -0.3 -1.5 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. -0.3 -1.1 -0.0 +0.2
carbon source Ying_Others16 rep B; time point 3 N.D. -0.1 -0.4 -0.6 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. -0.4 -0.7 +0.2 +0.2
carbon source Ying_sugar7 rep A; time point 3 N.D. +0.3 -0.5 -0.3 -0.1
carbon source Ying_all64 rep B; time point 3 N.D. +0.4 -0.1 -0.7 +0.2
carbon source Ying_all64 rep A; time point 3 N.D. +0.3 -0.2 -0.5 +0.2
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. -0.2 -0.4 +0.7 -0.2
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. -0.4 -0.2 +0.4 +0.2
carbon source Ying_Others16 rep C; time point 2 N.D. -0.1 -0.4 +0.6 -0.1
carbon source Ying_AminoAcid20 rep A; time point 1 N.D. -0.3 -0.4 +0.9 -0.1
carbon source Ying_AminoAcid20 rep A; time point 2 N.D. +0.0 -0.5 +0.7 -0.2
carbon source Ying_sugar7 rep C; time point 2 N.D. -0.0 -0.6 +0.7 -0.0
carbon source Ying_AminoAcid20 rep B; time point 1 N.D. -0.1 -0.4 +0.7 -0.0
carbon source Ying_AminoAcid20 rep C; time point 1 N.D. -0.1 -0.5 +0.7 +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. -0.2 -0.3 +0.6 +0.1
carbon source Ying_Others16 rep B; time point 1 N.D. +0.0 -0.8 +1.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.1 -0.4 +0.5 +0.1
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. -0.2 -0.2 +0.6 +0.3
carbon source Ying_all64 rep B; time point 1 N.D. +0.1 -0.4 +0.8 +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. -0.1 -0.2 +0.7 +0.4
carbon source Ying_all64 rep C; time point 2 N.D. -0.1 -0.4 +1.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. -0.3 -0.2 +1.3 +0.0
carbon source Ying_Others16 rep C; time point 1 N.D. -0.3 -0.2 +0.9 +0.5
carbon source Ying_all64 rep C; time point 1 N.D. -0.5 +0.1 +1.2 +0.1
carbon source Ying_sugar7 rep A; time point 1 N.D. +0.3 -0.7 +1.0 +0.2
carbon source Ying_Others16 rep B; time point 2 N.D. -0.0 -0.3 +1.0 +0.3
carbon source Ying_all64 rep A; time point 1 N.D. -0.3 -0.3 +1.1 +0.5
carbon source Ying_OrganicAcid7 rep A; time point 1 N.D. +0.3 -0.4 +0.8 +0.3
carbon source Ying_sugar7 rep B; time point 1 N.D. +0.3 -0.2 +0.9 +0.3
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