Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2857 and GFF2858 are separated by 87 nucleotidesGFF2858 and GFF2859 overlap by 4 nucleotidesGFF2859 and GFF2860 are separated by 139 nucleotidesGFF2860 and GFF2861 overlap by 4 nucleotides GFF2857 - hypothetical protein, at 445,783 to 446,109 GFF2857 GFF2858 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 446,197 to 447,147 GFF2858 GFF2859 - LysR-family transcriptional regulator, at 447,144 to 448,076 GFF2859 GFF2860 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 448,216 to 449,082 GFF2860 GFF2861 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 449,079 to 449,900 GFF2861
Group Condition GFF2857 GFF2858 GFF2859 GFF2860 GFF2861
carbon source Ying_all64 rep C; time point 3 -0.6 +0.0 -0.4 -0.4 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 -0.1 -0.1 -0.6 -0.5
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.2 -0.3 -0.1 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 -0.2 -0.2 +0.0 -0.3 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.3 -0.1 -0.0 -0.3 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.0 -0.2 +0.1 -0.3 -0.3
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 +0.1 -0.0 -0.4 +0.0
carbon source Ying_AminoAcid20 rep A; time point 1 -0.2 -0.2 +0.3 -0.5 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.5 -0.1 -0.2 +0.3 -0.0
carbon source Ying_AminoAcid20 rep A; time point 3 -0.3 -0.0 +0.1 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 +0.1 -0.3 -0.2 -0.1
carbon source Ying_sugar7 rep B; time point 2 -0.2 -0.1 +0.4 -0.3 -0.2
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 -0.2 +0.3 -0.4 +0.3
carbon source Ying_all64 rep B; time point 2 -0.1 -0.0 +0.2 -0.4 +0.1
carbon source Ying_Others16 rep C; time point 2 -0.0 +0.1 -0.3 +0.1 -0.2
carbon source Ying_sugar7 rep C; time point 2 -0.0 -0.0 +0.5 -0.3 -0.3
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 +0.2 -0.0 -0.3 +0.1
carbon source Ying_all64 rep C; time point 2 -0.2 +0.5 +0.6 -0.4 -0.4
carbon source Ying_sugar7 rep C; time point 1 -0.0 -0.1 -0.1 +0.5 -0.2
carbon source Ying_AminoAcid20 rep B; time point 1 -0.0 -0.0 +0.2 +0.4 -0.3
carbon source Ying_all64 rep C; time point 1 -0.0 -0.4 +0.2 +0.3 +0.1
carbon source Ying_Nucleobase14 rep B; time point 2 +0.1 -0.1 +0.3 +0.1 -0.2
carbon source Ying_AminoAcid20 rep C; time point 1 +0.2 -0.3 +0.1 +0.2 +0.0
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 -0.1 +0.4 +0.2 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.2 -0.0 -0.1 +0.3 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 -0.1 -0.2 +0.7 -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -0.1 -0.3 +0.3 +0.2
carbon source Ying_sugar7 rep B; time point 1 -0.0 -0.1 +0.5 +0.4 -0.2
carbon source Ying_all64 rep A; time point 2 +0.3 -0.1 +0.0 +0.6 -0.1
carbon source Ying_Others16 rep A; time point 2 +0.2 +0.1 -0.2 +0.8 -0.1
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