Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2856 and GFF2857 are separated by 24 nucleotidesGFF2857 and GFF2858 overlap by 4 nucleotidesGFF2858 and GFF2859 are separated by 60 nucleotidesGFF2859 and GFF2860 are separated by 93 nucleotides GFF2856 - Transcriptional regulator, LysR family, at 279,439 to 280,398 GFF2856 GFF2857 - Permease of the drug/metabolite transporter (DMT) superfamily, at 280,423 to 281,310 GFF2857 GFF2858 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5), at 281,307 to 281,873 GFF2858 GFF2859 - Excinuclease ABC subunit C, at 281,934 to 283,901 GFF2859 GFF2860 - FIG00974036: hypothetical protein, at 283,995 to 285,065 GFF2860
Group Condition GFF2856 GFF2857 GFF2858 GFF2859 GFF2860
complex community Community=guar; Passage=4 -0.7 -0.1 N.D. -0.5 N.D.
complex community Community=guar; Passage=4 -0.8 +0.1 N.D. -0.3 N.D.
complex community Community=arabino-guar; Passage=4 -0.8 +0.1 N.D. -0.4 N.D.
complex community Community=guar; Passage=4 -0.5 +0.1 N.D. -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 N.D. -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.4 +0.2 N.D. -0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 N.D. -0.4 N.D.
phage phage_bap4 -0.4 -0.0 N.D. -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 N.D. -0.2 N.D.
phage phage_bap4 -0.3 -0.1 N.D. -0.1 N.D.
phage phage_bap4 -0.0 -0.1 N.D. -0.2 N.D.
no phage control no phage control -0.2 +0.1 N.D. -0.1 N.D.
complex community Community=Kojac gum; Passage=4 -0.5 +0.3 N.D. +0.1 N.D.
phage phage_bap4 -0.2 +0.2 N.D. -0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.0 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.0 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.0 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.0 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.1 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.1 N.D. -0.0 N.D.
complex community Community=guar; Passage=4 +0.0 +0.1 N.D. +0.2 N.D.
complex community Community=Locust bean gum; Passage=1 +0.2 +0.1 N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.1 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 N.D. -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.0 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 +0.1 N.D. +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.0 N.D. +0.2 N.D.
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