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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2848 and GFF2849 are separated by 226 nucleotides
GFF2849 and GFF2850 overlap by 8 nucleotides
GFF2850 and GFF2851 are separated by 42 nucleotides
GFF2851 and GFF2852 are separated by 80 nucleotides
GFF2848 - Flagellin protein FlaA, at 2,903,656 to 2,904,744
GFF2848
GFF2849 - hypothetical protein, at 2,904,971 to 2,906,581
GFF2849
GFF2850 - response regulator receiver protein, at 2,906,574 to 2,907,182
GFF2850
GFF2851 - Transcriptional regulator, LysR family, at 2,907,225 to 2,908,121
GFF2851
GFF2852 - hypothetical protein, at 2,908,202 to 2,909,437
GFF2852
Group
Condition
GFF2848
GFF2849
GFF2850
GFF2851
GFF2852
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.4
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.0
-0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
+0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.0
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
+0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.2
+0.0
+0.1
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