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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2846 and GFF2847 are separated by 97 nucleotides
GFF2847 and GFF2848 are separated by 128 nucleotides
GFF2848 and GFF2849 overlap by 32 nucleotides
GFF2849 and GFF2850 overlap by 25 nucleotides
GFF2846 - ProQ: influences osmotic activation of compatible solute ProP, at 368,474 to 369,160
GFF2846
GFF2847 - Free methionine-(R)-sulfoxide reductase, contains GAF domain, at 369,258 to 369,755
GFF2847
GFF2848 - Paraquat-inducible protein A, at 369,884 to 371,167
GFF2848
GFF2849 - Paraquat-inducible protein B, at 371,136 to 373,769
GFF2849
GFF2850 - Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-), at 373,745 to 375,286
GFF2850
Group
Condition
GFF2846
GFF2847
GFF2848
GFF2849
GFF2850
phage
6F2_phage 15 MOI
-1.2
-0.3
-0.0
-0.0
-0.4
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-0.5
-0.7
-0.1
-0.1
-0.3
phage
6F2_phage 15 MOI
-0.9
+0.1
-0.1
-0.2
-0.5
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.6
-0.2
-0.4
-0.1
-0.3
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.4
-0.5
+0.1
-0.1
-0.3
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.1
-0.4
+0.1
-0.1
-0.6
phage
6F2_phage 15 MOI
-1.0
+0.4
-0.1
-0.0
-0.4
phage
phi19h1_phage 15 MOI
-0.3
+0.1
-0.3
+0.0
-0.5
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-1.0
-1.5
+0.3
+0.1
+1.0
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.5
-0.2
-0.0
-0.3
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.0
-0.8
-0.0
-0.2
+0.3
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.3
-0.2
-0.1
-0.2
+0.3
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.6
+0.3
-0.1
-0.3
+0.3
phage
phi19h1_phage 15 MOI
+0.1
+0.1
+0.1
+0.2
-0.8
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.0
-0.6
-0.2
-0.0
+0.4
micoeukaryotes
Acanthamoeba sp., muxed culture-1
-0.6
+0.4
-0.1
+0.1
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.4
-1.1
+0.0
+0.1
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.2
-1.3
+0.1
+0.2
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.1
-0.4
+0.0
-0.2
+0.6
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.7
+0.1
+0.2
-0.3
+0.6
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.1
-0.5
+0.1
+0.1
+0.6
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.4
+0.5
+0.3
-0.1
+0.0
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.5
+0.2
+0.2
-0.4
+0.6
phage
Ffm_phage 10 MOI; agar plate assay
+0.7
+0.5
-0.6
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+0.4
-0.5
+0.1
-0.0
+0.3
phage
6H2_phage 10 MOI; agar plate assay
+0.9
+0.6
-0.1
+0.1
-0.9
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.5
+0.2
+0.1
+0.0
+0.5
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.9
+0.8
-0.1
+0.1
-0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+1.0
+0.1
-0.0
+0.3
+1.0
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.9
+1.0
+0.8
+0.8
+0.9
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