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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2824 and GFF2825 are separated by 159 nucleotides
GFF2825 and GFF2826 are separated by 89 nucleotides
GFF2826 and GFF2827 are separated by 261 nucleotides
GFF2827 and GFF2828 are separated by 120 nucleotides
GFF2824 - TonB-dependent hemin, ferrichrome receptor, at 250,769 to 252,982
GFF2824
GFF2825 - Alkyl hydroperoxide reductase protein F, at 253,142 to 254,698
GFF2825
GFF2826 - Alkyl hydroperoxide reductase protein C (EC 1.11.1.15), at 254,788 to 255,351
GFF2826
GFF2827 - Bacterioferritin (EC 1.16.3.1), at 255,613 to 256,089
GFF2827
GFF2828 - Uncharacterized protein CC_3059, at 256,210 to 256,854
GFF2828
Group
Condition
GFF2824
GFF2825
GFF2826
GFF2827
GFF2828
complex community
Community=arabino-guar; Passage=4
-0.1
-1.2
-1.3
+0.2
-0.2
complex community
Community=Kojac gum; Passage=4
-0.0
-0.8
-1.0
-0.3
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-1.2
-1.1
-0.2
+0.7
complex community
Community=arabino-guar; Passage=4
+0.1
-0.6
-1.1
+0.2
-0.5
complex community
Community=arabino-guar; Passage=4
-0.1
-0.8
-0.8
+0.3
-0.2
complex community
Community=guar; Passage=4
+0.1
-0.5
-1.2
+0.1
-0.0
complex community
Community=guar; Passage=4
-0.0
-0.7
-1.1
+0.0
+0.3
phage
phage_bap4
-0.1
-0.2
-0.2
-0.3
-0.5
complex community
Community=guar; Passage=4
+0.3
-0.9
-1.0
-0.1
+0.6
complex community
Community=Locust bean gum; Passage=4
+0.0
-0.6
-0.6
-0.0
+0.2
complex community
Community=guar; Passage=4
+0.0
-1.0
-0.6
+0.3
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.2
-0.5
-0.2
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.4
-0.6
-1.1
-0.1
+0.5
phage
phage_bap4
-0.0
-0.2
-0.4
-0.3
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.2
-0.5
-0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.0
-0.1
-0.4
-0.0
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.1
-0.4
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
-0.5
-0.0
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.0
-0.7
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.2
-0.3
-0.0
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-0.1
-0.5
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.1
-0.3
-0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.1
-0.4
+0.0
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.1
-0.5
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-0.2
-0.4
+0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.5
-0.8
+0.2
+0.4
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.1
-0.6
+0.0
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.0
-0.3
-0.5
-0.1
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.0
-0.5
+0.2
-0.1
phage
phage_bap4
-0.1
-0.1
-0.1
-0.2
+0.3
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