Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF280 and GFF281 are separated by 172 nucleotidesGFF281 and GFF282 are separated by 61 nucleotidesGFF282 and GFF283 overlap by 4 nucleotidesGFF283 and GFF284 are separated by 31 nucleotides GFF280 - BUG/TctC family periplasmic protein, at 314,718 to 315,692 GFF280 GFF281 - Outer membrane porin protein 32 precursor, at 315,865 to 316,884 GFF281 GFF282 - hypothetical protein, at 316,946 to 318,133 GFF282 GFF283 - no description, at 318,130 to 319,224 GFF283 GFF284 - putative 2-pyrone-4,6-dicarboxylic acid hydrolase, at 319,256 to 320,149 GFF284
Group Condition GFF280 GFF281 GFF282 GFF283 GFF284
phage phage_bap4 -0.3 -0.1 +0.1 -0.5 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 +0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 -0.6 -0.1
complex community Community=Kojac gum; Passage=1 -0.3 +0.3 +0.0 -0.4 -0.0
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.0 -0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.0 +0.2 -0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.3 -0.4 -0.0
complex community Community=guar; Passage=4 -0.3 -0.1 +0.2 +0.2 +0.1
complex community Community=guar; Passage=4 +0.0 -0.3 +0.3 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.1 +0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 +0.1 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 +0.1 +0.5 -0.0
phage phage_bap4 +0.2 -0.2 +0.1 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.1 +0.1 +0.4 +0.1
phage phage_bap4 +0.2 +0.0 +0.1 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 +0.4 +0.2 +0.1 +0.0
phage phage_bap4 +0.3 +0.0 +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.1 +0.0 +0.7 +0.0
complex community Community=arabino-guar; Passage=4 +0.3 +0.3 -0.1 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 +0.3 +0.5 -0.0
phage phage_bap4 +0.1 -0.0 +0.1 +0.6 +0.1
complex community Community=guar; Passage=4 -0.0 -0.0 -0.0 +0.6 +0.4
no phage control no phage control +0.1 +0.1 +0.2 +0.4 +0.2
complex community Community=guar; Passage=4 +0.2 -0.2 +0.3 +0.4 +0.4
complex community Community=arabino-guar; Passage=4 +0.3 +0.2 +0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 +0.1 +0.8 +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 +0.2 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.4 +0.3 +0.5 +0.4
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 +0.5 +1.2 +0.4
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