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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2809 and GFF2810 overlap by 1 nucleotides
GFF2810 and GFF2811 overlap by 4 nucleotides
GFF2811 and GFF2812 overlap by 8 nucleotides
GFF2812 and GFF2813 are separated by 10 nucleotides
GFF2809 - Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3), at 408,141 to 409,217
GFF2809
GFF2810 - Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3), at 409,217 to 410,293
GFF2810
GFF2811 - Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3), at 410,290 to 411,183
GFF2811
GFF2812 - Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3), at 411,176 to 411,988
GFF2812
GFF2813 - FIG00761799: membrane protein, at 411,999 to 412,307
GFF2813
Group
Condition
GFF2809
GFF2810
GFF2811
GFF2812
GFF2813
carbon source
Ying_all64 rep B; time point 3
-0.2
-0.2
-0.0
-0.1
-0.7
carbon source
Ying_all64 rep C; time point 3
+0.0
+0.0
-0.1
-0.1
-0.8
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.4
-0.3
-0.2
-0.1
+0.3
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.0
-0.2
-0.3
-0.2
+0.0
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.1
-0.3
-0.3
-0.3
+0.4
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.0
+0.1
-0.1
-0.2
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
-0.3
-0.1
-0.4
+0.2
carbon source
Ying_all64 rep C; time point 2
-0.2
-0.2
-0.3
+0.0
+0.2
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.5
+0.1
+0.2
-0.0
-1.4
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.2
-0.1
-0.2
-0.2
+0.3
carbon source
Ying_sugar7 rep C; time point 2
+0.2
+0.3
-0.1
-0.1
-0.6
carbon source
Ying_all64 rep A; time point 3
-0.3
-0.0
+0.1
-0.4
+0.3
carbon source
Ying_Others16 rep C; time point 1
-0.1
+0.2
+0.1
-0.0
-0.4
carbon source
Ying_Others16 rep C; time point 2
+0.0
+0.2
-0.3
-0.2
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
-0.1
-0.1
-0.2
+0.5
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.0
+0.3
+0.3
-0.1
-0.4
carbon source
Ying_Others16 rep B; time point 2
+0.1
+0.0
-0.2
-0.2
+0.3
carbon source
Ying_all64 rep B; time point 1
+0.0
+0.0
+0.1
-0.4
+0.6
carbon source
Ying_sugar7 rep B; time point 1
+0.2
+0.1
-0.1
-0.2
+0.5
carbon source
Ying_all64 rep A; time point 1
+0.0
-0.0
-0.3
-0.3
+1.1
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.0
+0.0
-0.0
-0.2
+0.7
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+0.0
-0.1
-0.1
+0.6
carbon source
Ying_sugar7 rep B; time point 2
-0.1
+0.1
+0.0
-0.1
+0.7
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.0
+0.0
-0.2
-0.1
+1.1
carbon source
Ying_all64 rep C; time point 1
-0.0
+0.1
+0.1
-0.1
+0.6
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.3
+0.3
+0.2
-0.1
+0.0
carbon source
Ying_Others16 rep A; time point 3
+0.1
+0.1
+0.0
+0.5
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.2
+0.4
+0.3
+0.0
+0.1
carbon source
Ying_all64 rep A; time point 2
-0.1
+0.1
+0.0
+0.1
+1.1
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.2
+0.5
+0.3
+0.1
+0.8
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