Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01420	PS417_01425	PS417_01430	PS417_01435	PS417_01440
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-1.0	-0.2	-1.3	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.5	-1.2	+0.3	-0.4
agar plate interaction control	Taped volatile agar plate with no fungus	+0.3	-0.8	+0.2	-2.0	+0.3
soil	soil sample 7; outgrowth in LB	+0.6	+0.7	+0.0	-1.7	-0.7
phage	P. simiae OR Antrim MOI 0.1	+1.4	-0.1	+0.1	-1.6	-0.3
phage	P. simiae ORA MOI 0.1	+1.2	-2.0	-0.3	+0.7	+0.3
liquid stress	80% Methanol 2 mM; liquid stress	+2.1	-0.1	-0.0	-1.1	-0.2
phage	P. simiae ORA MOI 10	+1.4	-1.2	-0.3	+0.9	+0.2
phage	JP1 MOI 10	+2.5	+0.3	+0.2	-1.7	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	+0.1	-0.1	+2.0	-0.2
liquid stress	Scopoletin 2 mM; liquid stress	+1.9	+0.6	-0.4	-0.5	-0.0
liquid stress	Fraxetin 2 mM; liquid stress	+1.7	+0.5	-0.4	-0.3	+0.2
soil	soil sample 8; outgrowth in LB	+1.6	+0.5	-0.8	+0.6	-0.1
phage	P. simiae OR Antrim MOI 1	+1.4	+0.5	-0.5	+0.8	+0.1
phage	P. simiae OR Antrim MOI 10	+1.6	-0.4	+0.3	+1.0	-0.0
stress	Choline chloride 300 mM	+3.0	+0.1	+0.2	-1.1	+0.3
phage	JP1 MOI 1	+2.4	-0.9	-0.4	+1.3	+0.4
phage	P. simiae Grant Run MOI 10	+1.7	-0.2	+0.6	+0.2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.0	-0.2	+0.7	+1.1	+1.1
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	+0.3	+0.3	-0.1	+1.9	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+1.4	+0.4	+0.7	+0.9
supernatant control	Vogels_fungal_media 0.1X	+0.6	+1.2	+0.8	+0.5	+0.3
stress	Dimethyl Sulfoxide 5 vol%	+3.2	-0.2	+0.2	+0.1	+0.1
phage	P. simiae OR Antrim MOI 0.1	+1.5	-0.2	+0.6	+1.1	+0.4
phage	JP1 MOI 10	+2.7	+0.3	+0.1	+0.6	-0.0
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+2.2	+0.3	+0.8	+0.5	-0.1
stress	LB_noSalt with Chloride 500 mM	+3.0	-0.2	+0.6	+0.2	+0.2
stress	LB_noSalt with Chloride 500 mM	+2.9	+0.0	+0.4	+0.4	+0.3
stress	LB_noSalt with Chloride 1100 mM	+1.7	+0.6	+0.8	+0.6	+0.7
phage	JP1 MOI 1	+2.4	+0.5	-0.3	+2.4	-0.4